This repository contains an RMarkdown report to be used for QAQC on stream temperature data and a separate script to generate multiple reports at once. The report exports renamed, cleaned CSV files and generates a set of plotly graphs showing:
- One graph per station showing all 3 sensors data at the respective station (e.g. air, surface water and subsuface)
- One graph per sensor type showing all sensors of the same type (e.g. surface water) within the basin.
- Raster representation of surface water.
Sample input data is provided in the data_input folder and a "key" to tie specific sensors to specific sites is in the metadata folder. The report can be generated manually per basin or through the iterator script. The renamed, cleaned CSV files generate are set to export to ".../data_output/cleaned_csvs/".