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adding another yaml, "just for the fun" and for showing a proof of pr…
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…inciple that this could simply work
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federicomarini committed Oct 2, 2024
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datasets:
- id: Tonsil_epithelial
title: Tonsil Data - Epithelial
uri: runr://HCATonsilData::HCATonsilData(assayType = "RNA", cellType = "epithelial")
description: |
Tonsil Data - Epithelial, 396 cells
<p align="center">
<img src="https://github.com/Bioconductor/BiocStickers/blob/devel/iSEE/iSEE.png?raw=true" alt="" height = "150"/>
</p>
- id: ReprocessedAllenData
title: ReprocessedAllenData
uri: https://zenodo.org/record/8076991/files/ReprocessedAllenData.rds
description: |
Reprocessed Allen Data.
- id: BuettnerESCData
title: BuettnerESCData
uri: https://zenodo.org/record/8076991/files/BuettnerESCData.rds
description: |
Reprocessed Allen Data (copy).
initial:
- id: Tonsil_epithelial_full5
datasets:
- Tonsil_epithelial
title: Tonsil_epithelial configuration 1 (R call)
uri: rcall://system.file(package='iSEEindex','tonsils_example/hca_tonsil_epithelial_v2.R')
# uri: localhost:///Users/fede/Development/iSEEindex/hca_tonsil_epithelial_v2.R
# uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_01.R')
description: |
touring around, first go
- id: config01rcall
datasets:
- ReprocessedAllenData
title: Example configuration 1 (R call)
uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_01.R')
description: |
One `ReducedDimensionPlot` panel, one `ColumnDataTable` panel.
File distributed with the `iSEEindex` package.
- id: config02rcall
datasets:
- ReprocessedAllenData
title: Example configuration 2 (R call)
uri: rcall://system.file(package='iSEEindex','ReprocessedAllenData_config_02.R')
description: |
One `RowDataTable` panel, one `ColumnDataTable` panel.
File distributed with the `iSEEindex` package.

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