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Merge pull request #38 from hancockinformatics/fix_help
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Reduced the size of some images in the help pages.
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travis-m-blimkie authored Mar 18, 2024
2 parents 0b5011c + b199688 commit 75a112f
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Package: ABCindex
Title: A Shiny app to calculate ABCI for checkerboard assays
Version: 0.99.71
Version: 0.99.72
Authors@R:
person(given = "Travis",
family = "Blimkie",
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8 changes: 4 additions & 4 deletions www/help/help.html
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Expand Up @@ -156,7 +156,7 @@ <h2 class="accordion-header">
designed, to the best of our knowledge, to be accessible for
people with protanopia, deuteranopia, or tritanopia.
</p>
<img src="img/colours_abci.svg" alt="ABCI palettes" class="center img-fluid" style="width:50%">
<img src="img/colours_abci.svg" alt="ABCI palettes" class="center img-fluid" style="width:40%">
</div>
</div>
</div>
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against <i>Pseudomonas aeruginosa</i> PAO1 in both biofilm inhibition
(top) and biofilm eradication assays (bottom).
</p>
<img src="help/haney_figure.png" alt="Haney et al." class="center img-fluid" style="width:75%">
<img src="help/haney_figure.png" alt="Haney et al." class="center img-fluid" style="width:65%">
<p>
ABCI is a simple metric designed to accurately describe the effects of
drug combinations even when they present unusual dose-response curves.
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the individual drugs, divided by the combined effects of the two
individual drugs. It can be calculated as follows:
</p>
<img src="help/abci_formula.png" alt="ABCI formula" class="center img-fluid" style="width:75%">
<img src="help/abci_formula.png" alt="ABCI formula" class="center img-fluid" style="width:65%">
<p>The resulting ABCI value can then be interpreted as follows:</p>
<ul>
<li>
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Combination Index can be generalized to the combination of
<i>n</i> drugs as follows:
</p>
<img src="help/abci_formula_general.png" alt="Generalized ABCI formula" class="center img-fluid" style="width:75%">
<img src="help/abci_formula_general.png" alt="Generalized ABCI formula" class="center img-fluid" style="width:65%">
</div>
</div>
</div>
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