Run samtools flagstat on a set of CRAM files. Generate a MultiQC report from the output.
To run:
nextflow run https://github.com/grbot/cram-qc --input "/path/*.cram"
or
nextflow run https://github.com/grbot/cram-qc --input "1.cram 2.cram 3.cram"
-
Notifications
You must be signed in to change notification settings - Fork 1
License
grbot/cram-qc
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
No description, website, or topics provided.
Resources
License
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published