STREAM.Plot2DVisualization is used to check if there is clear meaningful trajectory pattern via TSNE or UMAP 2-D plots. If so, we can continue the STREAM analysis; If not, go back to previous steps (preprocessing, feature selection and dimension reduction) to modify the parameters.
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UMap or TSNE validation plots
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genepattern/STREAM.Plot2DVisualization
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UMap or TSNE validation plots
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