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FlashPCA 2.0

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@gabraham gabraham released this 21 Dec 03:00
· 49 commits to master since this release
v2.0
b45400e

FlashPCA2

Major changes

  • v2.0 replaces the randomised PCA algorithm of v1 with Spectra's IRAM, making it faster and more stable, while using less memory.
  • Most of the commandline functionality is also available within R (using the standalone package flashpcaR).

Files in this release

  • flashpcaR, standalone R package
    • flashpcaR_2.0.tar.gz: flashpcaR source package for Linux
    • flashpcaR_2.0.tgz: flashpcaR binary package for Mac Intel 64-bit
    • flashpcaR_2.0.zip: flashpcaR binary package for Windows
  • flashpca (command line tool)
    • flashpca_x86-64.gz: statically-linked binary for Linux (>=2.6.15), compiled with gcc 5.1.1, Eigen 3.3.0, boost 1.55, with march=core2
    • flashpca-mac-intel: dynamically-linked binary for Mac Intel 64-bit
  • Source for flashpca and flashpcaR (compiling for your target system is recommended for best performance)
    • flashpca_2.0.tar.gz
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