dontrun -> donttest

cf. easystats/easystats#380
easystats · Sep 19, 2023 · 05b7165 · 05b7165
1 parent 2cac6ee
commit 05b7165
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Showing 31 changed files with 36 additions and 36 deletions.
diff --git a/R/bootstrap_model.R b/R/bootstrap_model.R
@@ -41,7 +41,7 @@
 #' @seealso [`bootstrap_parameters()`], [`simulate_model()`], [`simulate_parameters()`]
 #'
 #' @examplesIf require("boot", quietly = TRUE) && require("emmeans", quietly = TRUE)
-#' \dontrun{
+#' \donttest{
 #' model <- lm(mpg ~ wt + factor(cyl), data = mtcars)
 #' b <- bootstrap_model(model)
 #' print(head(b))

diff --git a/R/bootstrap_parameters.R b/R/bootstrap_parameters.R
@@ -34,7 +34,7 @@
 #'   to obtain non-parametric p-values.
 #'
 #' @examplesIf require("boot", quietly = TRUE) && require("emmeans", quietly = TRUE)
-#' \dontrun{
+#' \donttest{
 #' set.seed(2)
 #' model <- lm(Sepal.Length ~ Species * Petal.Width, data = iris)
 #' b <- bootstrap_parameters(model)

diff --git a/R/cluster_meta.R b/R/cluster_meta.R
@@ -32,7 +32,7 @@
 #'
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' data <- iris[1:4]
 #'
 #' rez1 <- cluster_analysis(data, n = 2, method = "kmeans")

diff --git a/R/compare_parameters.R b/R/compare_parameters.R
@@ -41,7 +41,7 @@
 #' # custom style
 #' compare_parameters(lm1, lm2, select = "{estimate}{stars} ({se})")
 #'
-#' \dontrun{
+#' \donttest{
 #' # custom style, in HTML
 #' result <- compare_parameters(lm1, lm2, select = "{estimate}<br>({se})|{p}")
 #' print_html(result)
@@ -51,7 +51,7 @@
 #' m1 <- lm(mpg ~ wt, data = mtcars)
 #' m2 <- glm(vs ~ wt + cyl, data = mtcars, family = "binomial")
 #' compare_parameters(m1, m2)
-#' \dontrun{
+#' \donttest{
 #' # exponentiate coefficients, but not for lm
 #' compare_parameters(m1, m2, exponentiate = "nongaussian")
 #'

diff --git a/R/display.R b/R/display.R
@@ -50,7 +50,7 @@
 #' mp <- model_parameters(model)
 #' display(mp)
 #'
-#' \dontrun{
+#' \donttest{
 #' data(iris)
 #' lm1 <- lm(Sepal.Length ~ Species, data = iris)
 #' lm2 <- lm(Sepal.Length ~ Species + Petal.Length, data = iris)

diff --git a/R/dof.R b/R/dof.R
@@ -53,7 +53,7 @@
 #'
 #' model <- glm(vs ~ mpg * cyl, data = mtcars, family = "binomial")
 #' dof(model)
-#' \dontrun{
+#' \donttest{
 #' if (require("lme4", quietly = TRUE)) {
 #'   model <- lmer(Sepal.Length ~ Petal.Length + (1 | Species), data = iris)
 #'   dof(model)

diff --git a/R/methods_aov.R b/R/methods_aov.R
@@ -80,7 +80,7 @@
 #' model_parameters(model)
 #'
 #' @examplesIf requireNamespace("lme4", quietly = TRUE)
-#' \dontrun{
+#' \donttest{
 #' mm <- lmer(Sepal.Length ~ Sepal.Big + Petal.Width + (1 | Species), data = df)
 #' model <- anova(mm)
 #'

diff --git a/R/methods_kmeans.R b/R/methods_kmeans.R
@@ -7,7 +7,7 @@
 #' @param ... Arguments passed to or from other methods.
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' #
 #' # K-means -------------------------------
 #' model <- kmeans(iris[1:4], centers = 3)
@@ -69,7 +69,7 @@ model_parameters.kmeans <- function(model, ...) {
 #' @inheritParams cluster_centers
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' #
 #' # Hierarchical K-means (factoextra::hkclust) ----------------------
 #' if (require("factoextra", quietly = TRUE)) {

diff --git a/R/methods_metafor.R b/R/methods_metafor.R
@@ -21,7 +21,7 @@
 #'   model <- rma(yi = effectsize, sei = stderr, method = "REML", data = mydat)
 #'   model_parameters(model)
 #' }
-#' \dontrun{
+#' \donttest{
 #' # with subgroups
 #' if (require("metafor", quietly = TRUE)) {
 #'   data(dat.bcg)

diff --git a/R/methods_mice.R b/R/methods_mice.R
@@ -148,7 +148,7 @@ model_parameters.mipo <- function(model,
 #'   fit <- with(data = imp, exp = lm(bmi ~ age + hyp + chl))
 #'   model_parameters(fit)
 #' }
-#' \dontrun{
+#' \donttest{
 #' # model_parameters() also works for models that have no "tidy"-method in mice
 #' if (require("mice", quietly = TRUE) && require("gee", quietly = TRUE)) {
 #'   data(warpbreaks)

diff --git a/R/methods_pam.R b/R/methods_pam.R
@@ -1,7 +1,7 @@
 #' @rdname model_parameters.kmeans
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' #
 #' # K-Medoids (PAM and HPAM) ==============
 #' if (require("cluster", quietly = TRUE)) {

diff --git a/R/methods_rstanarm.R b/R/methods_rstanarm.R
@@ -47,7 +47,7 @@
 #' @inheritSection model_parameters Confidence intervals and approximation of degrees of freedom
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' library(parameters)
 #' if (require("rstanarm")) {
 #'   model <- suppressWarnings(stan_glm(

diff --git a/R/n_clusters.R b/R/n_clusters.R
@@ -48,7 +48,7 @@
 #' @note There is also a [`plot()`-method](https://easystats.github.io/see/articles/parameters.html) implemented in the [**see**-package](https://easystats.github.io/see/).
 #'
 #' @examples
-#' \dontrun{
+#' \donttest{
 #' library(parameters)
 #'
 #' # The main 'n_clusters' function ===============================

diff --git a/R/n_factors.R b/R/n_factors.R
@@ -56,7 +56,7 @@
 #' result <- n_factors(mtcars[1:5], type = "FA")
 #' as.data.frame(result)
 #' summary(result)
-#' \dontrun{
+#' \donttest{
 #' # Setting package = 'all' will increase the number of methods (but is slow)
 #' n_factors(mtcars, type = "PCA", package = "all")
 #' n_factors(mtcars, type = "FA", algorithm = "mle", package = "all")

diff --git a/R/print.parameters_model.R b/R/print.parameters_model.R
@@ -216,7 +216,7 @@
 #' result <- compare_parameters(lm1, lm2, select = "{estimate}{stars} ({se})")
 #' print(result)
 #'
-#' \dontrun{
+#' \donttest{
 #' # custom style, in HTML
 #' result <- compare_parameters(lm1, lm2, select = "{estimate}<br>({se})|{p}")
 #' print_html(result)

diff --git a/R/simulate_parameters.R b/R/simulate_parameters.R
@@ -36,7 +36,7 @@
 #' model <- lm(Sepal.Length ~ Species * Petal.Width + Petal.Length, data = iris)
 #' simulate_parameters(model)
 #'
-#' \dontrun{
+#' \donttest{
 #' if (require("glmmTMB", quietly = TRUE)) {
 #'   model <- glmmTMB(
 #'     count ~ spp + mined + (1 | site),

diff --git a/man/bootstrap_model.Rd b/man/bootstrap_model.Rd
diff --git a/man/bootstrap_parameters.Rd b/man/bootstrap_parameters.Rd
diff --git a/man/cluster_meta.Rd b/man/cluster_meta.Rd
diff --git a/man/compare_parameters.Rd b/man/compare_parameters.Rd
diff --git a/man/degrees_of_freedom.Rd b/man/degrees_of_freedom.Rd
diff --git a/man/display.parameters_model.Rd b/man/display.parameters_model.Rd
diff --git a/man/model_parameters.aov.Rd b/man/model_parameters.aov.Rd
diff --git a/man/model_parameters.kmeans.Rd b/man/model_parameters.kmeans.Rd
diff --git a/man/model_parameters.mira.Rd b/man/model_parameters.mira.Rd
diff --git a/man/model_parameters.rma.Rd b/man/model_parameters.rma.Rd
diff --git a/man/model_parameters.stanreg.Rd b/man/model_parameters.stanreg.Rd
diff --git a/man/n_clusters.Rd b/man/n_clusters.Rd
diff --git a/man/n_factors.Rd b/man/n_factors.Rd
diff --git a/man/print.parameters_model.Rd b/man/print.parameters_model.Rd
diff --git a/man/simulate_parameters.Rd b/man/simulate_parameters.Rd