Merge pull request #162 from dockstore/feature/seab-5604 #926
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# This workflow will build a Java project with Maven | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/building-and-testing-java-with-maven | |
name: Node.js CI with SAM | |
on: [push, pull_request] | |
jobs: | |
linterWithESLint: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Use Node.js | |
uses: actions/setup-node@v1 | |
with: | |
node-version: 12.x | |
- run: npm install | |
- run: npm run lint | |
testWithSAMCLI: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Set up Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.8 | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install aws-sam-cli | |
- name: Test wdl parsing with SAM CLI build and invoke | |
working-directory: ./wdl-parsing | |
run: | | |
sam build --use-container | |
sam local invoke WDLParsingFunction -e events/event.json &> output.txt | |
grep "statusCode\": 200" output.txt | |
- name: Test Nextflow parsing with SAM CLI build (no invoke) | |
working-directory: ./nextflow-parsing | |
# SAM build also runs the Java tests | |
run: | | |
sam build --use-container | |
- name: Build CWL packing with SAM CLI build (no invoke, no test) | |
working-directory: ./cwlpack | |
run: sam build --use-container | |
- name: Test CWL packing with pytest | |
working-directory: ./cwlpack | |
run: | | |
pip install -r tests/requirements.txt --user | |
pip install -r cwl_pack_function/requirements.txt --user | |
python -m pytest tests/unit -v | |
pylint cwl_pack_function | |
pylint tests | |