Fix tests and whatnot #827
Workflow file for this run
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| # This workflow will build a Java project with Maven | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/building-and-testing-java-with-maven | |
| name: Node.js CI with SAM | |
| on: [push, pull_request] | |
| jobs: | |
| linterWithESLint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Use Node.js | |
| uses: actions/setup-node@v1 | |
| with: | |
| node-version: 12.x | |
| - run: npm install | |
| - run: npm run lint | |
| testWithSAMCLI: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.8 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install aws-sam-cli | |
| - name: Test with SAM CLI | |
| working-directory: ./upsertGitHubTag | |
| run: | | |
| sam local invoke HelloWorldFunction -e events/event.json -n env.json &> output.txt | |
| grep "Valid push event" output.txt | |
| - name: Test wdl parsing with SAM CLI build and invoke | |
| working-directory: ./wdl-parsing | |
| run: | | |
| sam build --use-container | |
| sam local invoke WDLParsingFunction -e events/event.json &> output.txt | |
| grep "statusCode\":200" output.txt | |
| - name: Test Nextflow parsing with SAM CLI build (no invoke) | |
| working-directory: ./nextflow-parsing | |
| # SAM build also runs the Java tests | |
| run: | | |
| sam build --use-container | |
| - name: Build CWL packing with SAM CLI build (no invoke, no test) | |
| working-directory: ./cwlpack | |
| run: sam build --use-container | |
| - name: Test CWL packing with pytest | |
| working-directory: ./cwlpack | |
| run: | | |
| pip install -r tests/requirements.txt --user | |
| pip install -r cwl_pack_function/requirements.txt --user | |
| python -m pytest tests/unit -v | |
| pylint cwl_pack_function | |
| pylint tests | |