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<ul class="current">
<li class="toctree-l1 current"><a class="reference internal current" href="#">Citations</a>
<ul class="current">
<li class="toctree-l2"><a class="reference internal" href="#euryale">EURYALE</a>
</li>
<li class="toctree-l2"><a class="reference internal" href="#nf-core">nf-core</a>
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<li class="toctree-l2"><a class="reference internal" href="#nextflow">Nextflow</a>
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<h1 id="dalmolingroupeuryale-citations">dalmolingroup/euryale: Citations</h1>
<h2 id="euryale"><a href="https://ieeexplore.ieee.org/document/10702116">EURYALE</a></h2>
<blockquote>
<p>J. V. F. Cavalcante, I. Dantas de Souza, D. A. A. Morais and R. J. S. Dalmolin, "EURYALE: A versatile Nextflow pipeline for taxonomic classification and functional annotation of metagenomics data," 2024 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), Natal, Brazil, 2024, pp. 1-7, doi: 10.1109/CIBCB58642.2024.10702116.</p>
</blockquote>
<h2 id="nf-core"><a href="https://pubmed.ncbi.nlm.nih.gov/32055031/">nf-core</a></h2>
<blockquote>
<p>Ewels PA, Peltzer A, Fillinger S, Patel H, Alneberg J, Wilm A, Garcia MU, Di Tommaso P, Nahnsen S. The nf-core framework for community-curated bioinformatics pipelines. Nat Biotechnol. 2020 Mar;38(3):276-278. doi: 10.1038/s41587-020-0439-x. PubMed PMID: 32055031.</p>
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<h2 id="citations">Citations</h2>
<blockquote>
<p>Morais DAA, Cavalcante JVF, Monteiro SS, Pasquali MAB and Dalmolin RJS (2022)
MEDUSA: A Pipeline for Sensitive Taxonomic Classification and Flexible Functional Annotation
of Metagenomic Shotgun Sequences.
Front. Genet. 13:814437. doi: 10.3389/fgene.2022.814437</p>
<p>J. V. F. Cavalcante, I. Dantas de Souza, D. A. A. Morais and R. J. S. Dalmolin, "EURYALE: A versatile Nextflow pipeline for taxonomic classification and functional annotation of metagenomics data,"
2024 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), Natal, Brazil, 2024, pp. 1-7,
doi: 10.1109/CIBCB58642.2024.10702116.</p>
</blockquote>
<p>This pipeline uses code and infrastructure developed and maintained by the <a href="https://nf-co.re">nf-core</a> community, reused here under the <a href="https://github.com/nf-core/tools/blob/master/LICENSE">MIT license</a>.</p>
<blockquote>
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