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44 Open 67 Closed
44 Open 67 Closed
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Issues list

Importing a workflow with embedded tools fails if the latest CWL version is a development one
#147 opened Oct 1, 2024 by nsoranzo
Support outputs_to_working_directory
#146 opened Sep 5, 2023 by mvdbeek
UI for CWL workflow/tool execution
#145 opened Oct 7, 2022 by mr-c
2
default values of "class: File" or "class: Directory" need persisting
#144 opened Dec 10, 2021 by mr-c
@mvdbeek
1
Update Cwl interactor to target newer upload tool
#143 opened Dec 9, 2021 by mvdbeek
Diagnosis of failing tests
#142 opened Dec 8, 2021 by mvdbeek
6 of 20 tasks
TypeError: unhashable type: 'list'
#141 opened Nov 16, 2021 by mr-c
2
Better $(runtime) support
#135 opened Nov 15, 2020 by mr-c
1 task
CI: report with CWL conformance test badges
#134 opened Nov 15, 2020 by mr-c
Figuring out path forward on complicated output sources
#126 opened Nov 10, 2020 by jmchilton
8
Parse creator and license information from CWL documents. friendliness/intermediate
#117 opened Nov 9, 2020 by jmchilton
1
Re-visit library vs. Galaxy usage of UUIDs in tool loading.
#113 opened Jan 13, 2020 by jmchilton
Documentation on CWL-in-Galaxy
#103 opened Apr 29, 2019 by stain
1
Refactor the hacky EphemeralCollection (inputs that are produced by expressions) in cwlbranch into something that can be included into Galaxy core. friendliness/hard target/galaxy target/galaxycwlbranch
#101 opened Mar 23, 2019 by jmchilton
Implement workflow input expressions for core that CWL can leverage. friendliness/hard target/galaxy target/galaxycwlbranch
#100 opened Mar 23, 2019 by jmchilton
Polish and enhance FieldType handling to get it into core. friendliness/hard target/galaxy target/galaxycwlbranch
#99 opened Mar 23, 2019 by jmchilton
Refactor specifying an object_id for workflows into Galaxy core. friendliness/intermediate target/galaxy target/galaxycwlbranch
#96 opened Mar 22, 2019 by jmchilton
1
The tool 'tmpugCygk#infernal-cmsearch-v1.1.2.cwl' is missing. Cannot build workflow module
#94 opened Dec 27, 2018 by ghost
Map tar file to 'Directory' type
#93 opened Dec 27, 2018 by ghost
KeyError exception when saving a packed workflow
#92 opened Dec 27, 2018 by ghost
TypeError exception when importing a packed workflow
#91 opened Dec 27, 2018 by ghost
Using galactic_cwl tools.
#88 opened Jul 1, 2018 by jmchilton
Run the EBI transcripts annotation workflows
#87 opened Jun 30, 2018 by hmenager
Allow Conditional Tool Parameters friendliness/hard target/galaxycwlbranch target/spec
#82 opened Sep 28, 2017 by jmchilton
Enable CWL Workflows to Specify Tools by "ID". friendliness/hard target/spec
#81 opened Sep 28, 2017 by jmchilton
1
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