update requirements #1

	name: Build and deploy documentation
	on:
	push:
	branches:
	- main
	- dev

	jobs:
	create-env:
	name: ${{ matrix.os }}
	runs-on: ${{ matrix.os }}
	defaults:
	run:
	shell: bash -l {0}

	strategy:
	fail-fast: false
	matrix:
	os: [macos-latest]

	steps:
	- name: checkout repo
	uses: actions/checkout@v3
	- name: create environment with mamba
	uses: conda-incubator/setup-miniconda@v2
	with:
	mamba-version: "*"
	channels: conda-forge,bioconda,defaults
	auto-activate-base: false
	activate-environment: osmg
	environment-file: envs/osmg.yaml
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install -r requirements_dev.txt
	python -m pip install -e .
	- name: Build docs
	run: cd docs && make html
	- name: Deploy to GitHub Pages
	uses: peaceiris/actions-gh-pages@v3
	with:
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: ./docs/build/html

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