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Detailed instructions to local notebooks and Streamlit
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chicolucio committed Aug 1, 2022
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4 changes: 2 additions & 2 deletions CONTRIBUTING.rst
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Expand Up @@ -97,18 +97,18 @@ This can easily be done via |venv|_::

python -m venv .venv
source .venv/bin/activate
pip install -r requirements-dev.txt

Clone the repository
--------------------

#. Create an user account on |the repository service| if you do not already have one.
#. Fork the project repository_: click on the *Fork* button near the top of the
page. This creates a copy of the code under your account on |the repository service|.
#. Clone this copy to your local disk::
#. Clone this copy to your local disk and install dev requirements::

git clone git@github.com:YourLogin/pH-diagrams.git
cd pH-diagrams
pip install -r requirements-dev.txt

#. Check if all tests are passing::

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42 changes: 34 additions & 8 deletions README.rst
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Expand Up @@ -30,6 +30,15 @@ pH diagrams
:alt: header animation
:align: center

|
Interactive web app:

.. image:: https://img.shields.io/badge/-Streamlit%20app-FF4B4B?style=for-the-badge&logo=Streamlit&logoColor=white
:alt: Streamlit app
:align: center
:target: https://phdiagrams.herokuapp.com/

Installation
============

Expand Down Expand Up @@ -67,10 +76,6 @@ Changing the ``backend`` parameter to ``plotly``, and removing the ``ax`` parame
(it works only with Matplotlib), will open a browser window for each plot.
Since Plotly_ is interactive, the user can zoom, pan, and see values on hover.

For more basic usage examples, see the ``tutorial.ipynb`` notebook on ``notebooks`` folder.
In the same folder, the ``tutorial_interactive_ipywidgets.ipynb`` file shows how to
use ipywidgets_ to create interactive diagrams.

Full documentation is hosted on `Read the Docs`_.

A live interactive version of this project can be seen clicking in the following badge:
Expand All @@ -82,13 +87,33 @@ A live interactive version of this project can be seen clicking in the following

The web app was made with Streamlit_ and hosted on Heroku_.

A local version of the Streamlit_ app can be used cloning the repo and running
``streamlit run Home.py`` on a terminal. A browser window will open (if not, follow
the instructions shown on the terminal output).

A brief explanation on the chemical theory behind each diagram can be seen
`here <https://phdiagrams.herokuapp.com/How_to_use_and_theory>`_.

Local Streamlit app and Jupyter notebooks
-----------------------------------------

This repo has Jupyter Notebooks and scripts for a fully functional
Streamlit_ app. First, create a virtual environment, clone the repo and
install dependencies::

python -m venv .venv
source .venv/bin/activate
git clone git@github.com:chicolucio/pH-diagrams.git
cd pH-diagrams
pip install -r requirements.txt

This considers that you have `Jupyter Notebook`_ installed. If not, install it with
``pip install notebook``.

For more basic usage examples, see the ``tutorial.ipynb`` notebook on ``notebooks`` folder.
In the same folder, the ``tutorial_interactive_ipywidgets.ipynb`` file shows how to
use ipywidgets_ to create interactive diagrams. Just run ``jupyter notebook`` on a
terminal from the repo root folder and select the files.

A local version of the Streamlit_ app can be used running, from the repo root folder,
``streamlit run Home.py`` on a terminal. A browser window will open (if not, follow
the instructions shown on the terminal output).

Contributing
============
Expand Down Expand Up @@ -132,3 +157,4 @@ If you use this project in a scientific publication or in classes, please consid
.. _contributing guide: CONTRIBUTING.rst
.. _Read the Docs: https://ph-diagrams.readthedocs.io/en/latest/?badge=latest
.. _ipywidgets: https://ipywidgets.readthedocs.io/en/stable/
.. _Jupyter Notebook: https://jupyter.org/

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