Skip to content

Issues: cdanielmachado/smetana

failing to find medium
#13 opened Nov 19, 2020 by cdanielmachado
Open
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 28 Closed
21 Open 28 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Smetana addConstr() error while using gurobi solver
#51 opened Nov 22, 2024 by BananaJumper96
TypeError: add_variable() got an unexpected keyword argument 'update'
#50 opened Oct 21, 2024 by yyyuechen
6
Parallelization
#49 opened Sep 20, 2024 by KageyamaTakuya
Not a mixed-integer problem
#48 opened Aug 15, 2024 by phil622
Fails to find a minimal growth medium for photosynthetic organism
#46 opened Jun 25, 2024 by GediminasA
1
Re-order output file to follow SIF formatting
#45 opened May 9, 2024 by winatony
How to simulate large numbers of communities
#43 opened Jan 13, 2024 by LiZhihua1982
optimality is not an available tolerance parameter with this solver
#42 opened Sep 21, 2023 by LiZhihua1982
Specifying compartment identifiers
#40 opened Apr 2, 2023 by lauramhfur
CarveMe Models without Gap Filling for Smetana
#39 opened Mar 22, 2023 by pbelmann
8
The model cannot be read.
#38 opened Mar 17, 2023 by ChenCongZ
Adjusting the non-CarveMe GEMs to SMETANA
#36 opened Dec 6, 2022 by mohammadmirhakkak
2
smetana is not is not recognized as command
#35 opened Oct 18, 2022 by Clem-Jos
1
Inconsistent results of MIP calculation and community minimum growth requirement
#34 opened Jul 17, 2022 by EmmettPeng
2
Got an empty file with only the header
#33 opened Jun 28, 2022 by zoelwl
3
Issues when running with a 10 member community
#32 opened Apr 4, 2022 by amarsh26
MRO: Failed to find a valid solution
#28 opened Sep 30, 2021 by iuliachiciudean
"Reaction R_EX_M_h2o_e_pool not found" error
#23 opened Jun 25, 2021 by jdwinkler-lanzatech
3
N/A from MIP but value from MRO.
#22 opened Jun 7, 2021 by BurchamLab
17
Changes in result for -d and -g
#20 opened Apr 25, 2021 by ntromas
4
failing to find medium
#13 opened Nov 19, 2020 by cdanielmachado
ProTip! no:milestone will show everything without a milestone.