style: ruff format

src/variation/gnomad_vcf_to_protein_variation.py

@@ -10,6 +10,7 @@
 from gene.query import QueryHandler as GeneQueryHandler
 from gene.schemas import MatchType as GeneMatchType
 
+from variation import __version__
 from variation.classify import Classify
 from variation.schemas.classification_response_schema import Nomenclature
 from variation.schemas.gnomad_vcf_to_protein_schema import GnomadVcfToProteinService
@@ -19,7 +20,6 @@
 from variation.tokenize import Tokenize
 from variation.translate import Translate
 from variation.validate import Validate
-from variation import __version__
 
 
 class GnomadVcfToProteinError(Exception):

src/variation/normalize.py

@@ -7,6 +7,7 @@
 from cool_seq_tool.sources import UtaDatabase
 from ga4gh.vrs import models
 
+from variation import __version__
 from variation.classify import Classify
 from variation.schemas.app_schemas import Endpoint
 from variation.schemas.normalize_response_schema import (
@@ -25,7 +26,6 @@
 from variation.translate import Translate
 from variation.utils import update_warnings_for_no_resp
 from variation.validate import Validate
-from variation import __version__
 
 
 class Normalize(ToVRS):

src/variation/schemas/copy_number_schema.py

@@ -14,8 +14,8 @@
     model_validator,
 )
 
-from variation.schemas.normalize_response_schema import ServiceResponse
 from variation import __version__
+from variation.schemas.normalize_response_schema import ServiceResponse
 
 
 class ParsedPosType(str, Enum):

src/variation/schemas/hgvs_to_copy_number_schema.py

@@ -3,8 +3,8 @@
 from ga4gh.vrs import models
 from pydantic import ConfigDict, StrictStr
 
-from variation.schemas.normalize_response_schema import ServiceResponse
 from variation import __version__
+from variation.schemas.normalize_response_schema import ServiceResponse
 
 
 class HgvsToCopyNumberCountService(ServiceResponse):

src/variation/schemas/service_schema.py

@@ -6,8 +6,8 @@
 from cool_seq_tool.schemas import ToGenomicService as ToGenomic
 from pydantic import ConfigDict
 
-from variation.schemas.normalize_response_schema import ServiceMeta
 from variation import __version__
+from variation.schemas.normalize_response_schema import ServiceMeta
 
 
 class ClinVarAssembly(str, Enum):

src/variation/to_copy_number_variation.py

@@ -14,6 +14,7 @@
 from gene.schemas import MatchType as GeneMatchType
 from pydantic import ValidationError
 
+from variation import __version__
 from variation.classify import Classify
 from variation.schemas.app_schemas import Endpoint
 from variation.schemas.classification_response_schema import ClassificationType
@@ -43,7 +44,6 @@
 from variation.translate import Translate
 from variation.utils import get_priority_sequence_location
 from variation.validate import Validate
-from variation import __version__
 
 VALID_CLASSIFICATION_TYPES = [
     ClassificationType.GENOMIC_DUPLICATION,

src/variation/to_vrs.py

@@ -6,6 +6,7 @@
 from cool_seq_tool.handlers import SeqRepoAccess
 from ga4gh.vrs import models
 
+from variation import __version__
 from variation.classify import Classify
 from variation.schemas.app_schemas import Endpoint
 from variation.schemas.normalize_response_schema import (
@@ -18,7 +19,6 @@
 from variation.tokenize import Tokenize
 from variation.translate import Translate
 from variation.validate import Validate
-from variation import __version__
 from variation.vrs_representation import VRSRepresentation