Adding files for TCap wdl #65
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yueyaog
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Aug 26, 2024
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@MicahR-Y Can you format this json into a more readable version? The json download from Terra is not very readable. I can share a Python script I have to reformat it.
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@yueyaog coming back to this, can you share the python script you use to reformat json files?
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I created a PR of the json indenter script in TAG repo:
https://github.com/broadinstitute/TAG/pull/2139
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Submitting a PR with the WDL portion of the TCap workflow (not including the notebook and BigQuery). This is a direct copy of the current WARP pipeline that's running TCap, but I think we should have the version saved where we control it since TAG is taking over running TCap for the time being: https://dockstore.org/workflows/github.com/broadinstitute/warp/BroadInternalRNAWithUMIs:develop?tab=info