modify memory inputs for Qc.wdl

broadinstitute · Nov 4, 2024 · 0cececf · 0cececf
1 parent dd1f87b
commit 0cececf
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Showing 2 changed files with 8 additions and 3 deletions.
diff --git a/.dockstore.yml b/.dockstore.yml
@@ -138,4 +138,9 @@ workflows:
    subclass: WDL
    primaryDescriptorPath: /CNV_Array_Prober/cnvArrayProber.wdl
    testParameterFiles:
-    - /CNV_Array_Prober/cnvArrayProber.inputs.json
+    - /CNV_Array_Prober/cnvArrayProber.inputs.json
+ - name: WholeGenomeGermlineSingleSample
+   subclass: WDL
+   primaryDescriptorPath: /WholeGenomeGermlineSingleSample/pipelines/WholeGenomeGermlineSingleSample.wdl
+   testParameterFiles:
+    - /WholeGenomeGermlineSingleSample/pipelines/WholeGenomeGermlineSingleSample.options.json
diff --git a/WholeGenomeGermlineSingleSample/tasks/AggregatedBamQC.wdl b/WholeGenomeGermlineSingleSample/tasks/AggregatedBamQC.wdl
@@ -15,8 +15,8 @@ version 1.0
 ## page at https://hub.docker.com/r/broadinstitute/genomes-in-the-cloud/ for detailed
 ## licensing information pertaining to the included programs.
 
-import "../../tasks/broad/Qc.wdl" as QC
-import "../../structs/dna_seq/DNASeqStructs.wdl"
+import "../tasks/Qc.wdl" as QC
+import "../structs/DNASeqStructs.wdl"
 
 # WORKFLOW DEFINITION
 workflow AggregatedBamQC {