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  1. GCN-HGT GCN-HGT Public

    Prediction of horizontal gene transfer (HGT) using graph convolutional network

    Python 10 4

  2. PRO-seq PRO-seq Public

    Scripts and R code used to process sequencing data and generate figures for E. coli & microbiome PRO-seq

    Shell 1

  3. Global-and-taxonomic-ARG-prevelence Global-and-taxonomic-ARG-prevelence Public

    Code for the manuscript "Clinically relevant antibiotic resistance genes are linked to a restricted set of taxa within gut microbiome worldwide"

    Jupyter Notebook 1

  4. Human-microbiome-PPI Human-microbiome-PPI Public

    Host-microbiome protein-protein interactions capture disease-relevant pathways

    Jupyter Notebook

  5. ppi_autoimmune ppi_autoimmune Public

    Python

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Showing 5 of 5 repositories
  • britolab/ppi_autoimmune’s past year of commit activity
    Python 0 0 0 0 Updated Aug 25, 2024
  • Global-and-taxonomic-ARG-prevelence Public

    Code for the manuscript "Clinically relevant antibiotic resistance genes are linked to a restricted set of taxa within gut microbiome worldwide"

    britolab/Global-and-taxonomic-ARG-prevelence’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Oct 22, 2023
  • PRO-seq Public

    Scripts and R code used to process sequencing data and generate figures for E. coli & microbiome PRO-seq

    britolab/PRO-seq’s past year of commit activity
    Shell 1 MIT 0 0 0 Updated Oct 17, 2023
  • GCN-HGT Public

    Prediction of horizontal gene transfer (HGT) using graph convolutional network

    britolab/GCN-HGT’s past year of commit activity
    Python 10 MIT 4 1 0 Updated Apr 25, 2022
  • Human-microbiome-PPI Public

    Host-microbiome protein-protein interactions capture disease-relevant pathways

    britolab/Human-microbiome-PPI’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Mar 18, 2022

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