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2.7.1a
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alexdobin committed May 15, 2019
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STAR 2.7.1a 2019/05/14
STAR 2.7.1a 2019/05/15
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**This version requires re-generation of the genome indexes**

* Implemented collapsing of duplicate cell barcodes in the whitelist.
* Implemented --soloFeatures GeneFull which counts reads overlapping full genes, i.e. includes reads that overlap introns. This can be combined with other features, e.g. --soloFeatures Gene SJ GeneFull .
* Implemented --soloCBwhitelist None option for solo* demultiplexing without CB whitelist. In this case error correction for CBs is not performed.
* Implemented Cell Barcodes longer than 16 bases (but shorter than 31 bases). Many thanks to Gert Hulselmans for implementing this feature (#588).
* Implemented collapsing of duplicate cell barcodes in the whitelist.
* Implemented --sjdbGTFtagExonParentGeneName and --sjdbGTFtagExonParentGeneType options to load gene name and biotype attributes from the GTF file.
* Fixed problems created by missing gene/transcript ID, name and biotype attributes in GTF files (issues #613, #628).
* Added warning for incorrectly scaled --genomeSAindexNbases parameter (issue #614).
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