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Add orthoview AFID plot #230

Add orthoview AFID plot

Add orthoview AFID plot #230

Workflow file for this run

---
name: Lint and test workflow
on:
push:
branches: ['*', '!push-action/*']
pull_request:
branches: ['*', '!push-action/*']
jobs:
quality:
name: Lint code
if: github.event.pull_request.merged == false
runs-on: ubuntu-latest
steps:
- name: Setup Python environment
uses: khanlab/actions/.github/actions/action-setup_task-installPyProject@v0.2.2
with:
python-version: '3.10'
- name: yamlfix
run: poetry run poe yamlfix-check
- name: isort
run: poetry run poe isort-check
- name: black
run: poetry run poe black-check
- name: ruff
run: poetry run poe ruff-check
- name: pyright
run: poetry run poe pyright
test:
runs-on: ubuntu-latest
needs: [quality]
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11']
test-split: ['1', '2', '3', '4', '5']
steps:
- name: Setup Python environment
uses: khanlab/actions/.github/actions/action-setup_task-installPyProject@v0.2.2
with:
python-version: ${{ matrix.python-version }}
install-library: true
- name: Perform unit testing
run: >-
poetry run pytest -n auto --splits 5 --group ${{ matrix.test-split }} --doctest-modules --cov=afids_utils
afids_utils/tests/ --cov-report xml:../cov.xml
- name: Upload coverage
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ../cov.xml