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Feature: fill data gaps and bug fix trim start end times #84

Merged
merged 11 commits into from
Feb 24, 2023
Merged

Feature: fill data gaps and bug fix trim start end times #84

merged 11 commits into from
Feb 24, 2023

Commits on Feb 24, 2023

  1. pysep new parameter which allows users to fill gappy data with a give… 

    …n value

process function 'merge_and_trim_start_end_times' now takes fill value in order to fill in gappy data
added test to test gap filling
    @bch0w
    bch0w committed Feb 24, 2023
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  2. added gap_fraction parameter which allows selecting the overall perce… 

    …ntage length of allowable data gaps. defaults to 1 (100%). added test to cover this
    @bch0w
    bch0w committed Feb 24, 2023
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  3. added gap_fraction to pysep docstring and parameters

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    bch0w committed Feb 24, 2023
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  4. cleaned up docstrings for new parameters

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    bch0w committed Feb 24, 2023
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  5. split up processing function 'merge_and_trim...' into merge function … 

    …and trim function

trim function now takes actual expected start and end times rather than inferring from the data
bugfix gap percentage not accurately determinig total trace length
    @bch0w
    bch0w committed Feb 24, 2023
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  6. bugfix merge gapped data not returning any data

    @bch0w
    bch0w committed Feb 24, 2023
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  7. remove debugger statement

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    bch0w committed Feb 24, 2023
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  8. added a check in trim function for late starttimes and early endtimes… 

    … which would create incomplete data
    @bch0w
    bch0w committed Feb 24, 2023
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  9. changed default 'fill_data_gaps' value as False to be more intuitive

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    bch0w committed Feb 24, 2023
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  10. added new hidden variable 'extra_download_pct' which allows downloadi… 

    …ng an additional x% of data from data center because downloading the exact time bounds may lead to shorter waveforms after resampling or preprocessing. the extra downloaded data is trimmed away before being saved
    @bch0w
    bch0w committed Feb 24, 2023
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  11. fixing tests, trim start and end times ignored if no origin time give… 

    …n to allow for direct preprocessing of streams without event ifnormation
    @bch0w
    bch0w committed Feb 24, 2023
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