update pyscicat ingestion documentation #25
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| name: Integration tests V4 | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| container_job: | |
| runs-on: ubuntu-latest | |
| services: | |
| mongo: | |
| image: mongo | |
| ports: | |
| - 27107:27107 | |
| scicat-backend: | |
| image: ghcr.io/scicatproject/scicat-backend-next:stable | |
| ports: | |
| - 3000:3000 | |
| env: | |
| MONGODB_URI: mongodb://mongo:27017/scicat | |
| EXPRESS_SESSION_SECRET: "${EXPRESS_SESSION_SECRET}" | |
| JWT_SECRET: "${JWT_SECRET}" | |
| PORT: 3000 | |
| HTTP_MAX_REDIRECTS: 5 | |
| HTTP_TIMEOUT: 5000 | |
| JWT_EXPIRES_IN: 3600 | |
| SITE: SAMPLE-SITE | |
| PID_PREFIX: PID.SAMPLE.PREFIX | |
| DOI_PREFIX: DOI.SAMPLE.PREFIX | |
| METADATA_KEYS_RETURN_LIMIT: 100 | |
| METADATA_PARENT_INSTANCES_RETURN_LIMIT: 100 | |
| ADMIN_GROUPS: admin,ingestor | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: source continuous_integration/scripts/install.sh | |
| - run: | | |
| set -vxeuo pipefail | |
| python -m pip install . | |
| python -m pip install .[dev] | |
| python -m pip list | |
| - run: | | |
| set -vxeuo pipefail | |
| coverage run -m pytest tests/tests_integration/tests_integration.py | |
| coverage report | |
| env: | |
| BASE_URL: http://localhost:3000/api/v3 | |
| SCICAT_USER: ingestor | |
| SCICAT_PASSWORD: aman |