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@ids-bioinformatics ids-bioinformatics released this 06 Dec 15:40
v1.1.0
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1.1.0 (2022-12-06)

Features

  • add base of functionality to translate and write amino acid sequences (25884b7)
  • translate and extract aminoacids sequences for multiple targets (657aaff)

Bug Fixes

  • add the missing "FORWARD" and "REVERSE" primer keywords (74b92c6)
  • change found features to np.nan if input reference and features file don't match (3e812e4)
  • circumvent issue where null values cause problems in data translation steps (6007fca)
  • correctly parse amino acids that have a name with a dot in it (3e14dd5)
  • make sure all required info is present when no gff files are given (d589989)

Documentation

  • clarify some sections in the docs (9bc4171)
  • fix broken links (9bc4171)
  • update documentation to match new functionality (9bc4171)

Dependencies

  • add AminoExtract to dependency list (acb378e)
  • change minimal python version to 3.10 (acb378e)
  • pin AminoExtract version to v0.2.0 (cce1cf9)
  • pin AminoExtract version to v0.2.1 (c0e869f)
  • update TrueConsense to v0.5.0 and change rules accordingly (af15b9c)
  • update TrueConsense version to 0.5.1 (b1a61e4)
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