Biomedical Word Embeddings for Spanish: Development and Evaluation (v3.0)

Digital Object Identifier (DOI)

Files:

• Paper: https://arxiv.org/abs/2102.12843
• Biomedical Word Embeddings: https://doi.org/10.5281/zenodo.4543235
• Biomedical Sub-word Embeddings: http://doi.org/10.5281/zenodo.4557459
• Clinical Word Embeddings: http://doi.org/10.5281/zenodo.4552042
• Clinical Sub-word Embeddings: http://doi.org/10.5281/zenodo.4555598

Evaluation

We replicated the extrinsic evaluation from the paper Medical word embeddings for Spanish: Development and evaluation.

			Cased		Uncased
Version	Method	Corpora	Validation	Test	Validation	Test
v1.0	Skip-gram	Wiki	88.55	87.78	-	-
		SciELO	89.47	87.31	-	-
		SciELO+Wiki	89.42	88.17	-	-
v2.0	CBOW	Wiki	86.55	85.46	86.70	86.34
		SciELO	88.11	87.75	86.99	87.58
		SciELO+Wiki	88.68	86.58	86.65	85.27
	Skip-gram	Wiki	88.82	87.16	88.31	87.43
		SciELO	89.66	88.77	89.57	89.61
		SciELO+Wiki	88.76	88.64	89.82	88.28
v3.0	CBOW	Bio-Corpus	88.92	89.12	88.86	88.41
	Skip-gram		90.91	89.40	89.97	89.66

Citing

@misc{temu2021spanish,
      title={Spanish Biomedical and Clinical Language Embeddings}, 
      author={Asier Gutiérrez-Fandiño and Jordi Armengol-Estapé and Casimiro Pio Carrino and Ona De Gibert and Aitor Gonzalez-Agirre and Marta Villegas},
      year={2021},
      eprint={2102.12843},
      archivePrefix={arXiv},
      primaryClass={cs.CL}
}

License

This work is licensed under a Creative Commons Attribution 4.0 International License.

Copyright (c) 2021 Secretaría de Estado de Digitalización e Inteligencia Artificial (SEDIA)

Disclaimer

The models published in this repository are intended for a generalist purpose and are available to third parties. These models may have bias and/or any other undesirable distortions.

When third parties, deploy or provide systems and/or services to other parties using any of these models (or using systems based on these models) or become users of the models, they should note that it is their responsibility to mitigate the risks arising from their use and, in any event, to comply with applicable regulations, including regulations regarding the use of artificial intelligence.

In no event shall the owner of the models (SEDIA – State Secretariat for digitalization and artificial intelligence) nor the creator (BSC – Barcelona Supercomputing Center) be liable for any results arising from the use made by third parties of these models.

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