Add plotting methods (#295)

* Create test file

* Updated test file

* Plotting functions

* Pydantic validators for plotting args

* Re-add biomass option for bio heatmap

* Tweaks to script test

* Transfer changes

* Rearranging plot functions

* Start creating plotting notebook recipes

* Notebook documentation page for plotting

* Remove unnecessary files

* Fix plotting documentation

* Adjustment to doc page

* Re-add missed dependency (`verde`)

* Re-add missing dependency (`cartopy`)

* Test diagnostic plotting file

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Tweaks to example notebook

* Drop `None` from `kwargs.get(_param_, None)`

* Overhaul to plotting methods (#8)

* Update to notebook

* Changes to kriged plot variable options

* Plotting function changes

* Pre-commit adjustments

* Change to self-referencing pydantic model

* Streamline geospatial configuration parameter updating in `Survey.plot`

* Test new pydantic classes

* Pydantic validator overhauls

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

docs/_toc.yml

@@ -14,6 +14,7 @@ parts:
     sections:
     - file: example_notebooks/example_echopop_workflow
     - file: example_notebooks/report_generation
+    - file: example_notebooks/plotting.ipynb
   - file: theory
     title: Underlying theory
     sections: