the fre-cli conda package should have every dep i can think of... #7
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name: create_test_conda_env | |
on: [push] | |
jobs: | |
build-linux: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: '>=3.9' | |
- name: Add conda to system path | |
run: | | |
# $CONDA is an env var pointing to root of miniconda dir | |
echo $CONDA/bin >> $GITHUB_PATH | |
- name: Create fre-workflows environment | |
run: | | |
# create environment containing all dependencies | |
# the env cannot be explicitly activated in github CI/CD | |
conda env create -f environment.yml --name fre-workflows | |
# add conda env's executables to github's PATH equiv. | |
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH | |
- name: Run unittest in fre-workflows environment | |
run: | | |
# try to make sure the right things are in GITHUB_PATH | |
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH | |
# lint .cylc workflow files | |
cylc lint -v || echo "cylc lint threw non-zero exit code" | |
# unittests for data_lineage | |
cd data_lineage && python -m unittest discover -s test -v || echo "data_lineage unittest failed."; cd -; | |
# pytest unittests for make-timeseries | |
cd app/make-timeseries && pytest -v -v -x ./test || echo "pytest for make-timeseries failed"; cd -; | |
# pytest unittests for remap-pp-components | |
cd app/remap-pp-components && pytest -v -v -x ./t/ || echo "pytest for remap-pp-components failed"; cd -; | |
# pytest unittests for other things in this repository | |
pytest -v -v -x ./tests; |