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google/ffn
google/ffn PublicFlood-Filling Networks for instance segmentation in 3d volumes.
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ilastik/ilastik
ilastik/ilastik Publicilastik-shell, applets, and workflows to string them together.
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CRBS/cdeep3m
CRBS/cdeep3m PublicPlease go to https://github.com/CRBS/cdeep3m2 for most recent version
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constantinpape/cluster_tools
constantinpape/cluster_tools PublicDistributed segmentation for bio-image-analysis
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