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@MathOnco

IMO

Moffitt Cancer Center's Integrated Mathematical Oncology public facing repositories for published projects.

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  1. HAL HAL Public

    HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs

    Java 37 12

  2. NeoPredPipe NeoPredPipe Public

    Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

    Python 108 29

  3. EvoFreq EvoFreq Public

    Evolutionary frequency visualization tool of temporal data

    R 21 3

  4. Newsletter-Bibliography Newsletter-Bibliography Public

    LaTeX bibliography of the "This week in Math Onco" newsletter (https://mathematical-oncology.org/newsletter)

    TeX 2

Repositories

Showing 10 of 41 repositories
  • Newsletter-Bibliography Public

    LaTeX bibliography of the "This week in Math Onco" newsletter (https://mathematical-oncology.org/newsletter)

    MathOnco/Newsletter-Bibliography’s past year of commit activity
    TeX 2 0 0 0 Updated Oct 22, 2024
  • IMAT Public

    IMO Methods & Tools Lecture Series

    MathOnco/IMAT’s past year of commit activity
    0 0 0 0 Updated Oct 21, 2024
  • NeoPredPipe Public

    Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.

    MathOnco/NeoPredPipe’s past year of commit activity
    Python 108 LGPL-3.0 29 2 1 Updated Sep 2, 2024
  • valis Public

    Virtual Alignment of pathoLogy Image Series

    MathOnco/valis’s past year of commit activity
    Python 125 MIT 29 61 1 Updated Aug 20, 2024
  • HAL Public

    HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs

    MathOnco/HAL’s past year of commit activity
    Java 37 MIT 12 1 0 Updated Aug 19, 2024
  • DRL_Personalized_AT Public

    Mathematical Model-Driven Deep Learning Enables Personalized Adaptive Therapy

    MathOnco/DRL_Personalized_AT’s past year of commit activity
    Jupyter Notebook 2 2 0 0 Updated Aug 19, 2024
  • Mistic Public

    Multiplexed image tSNE visualizer

    MathOnco/Mistic’s past year of commit activity
    Python 38 MIT 6 0 0 Updated Jul 3, 2024
  • Mistic_code_live_cell_imaging Public
    MathOnco/Mistic_code_live_cell_imaging’s past year of commit activity
    Python 0 0 0 0 Updated Jul 2, 2024
  • CellCycle4DataIntegration Public

    Cell identity revealed by precise cell cycle state mapping links data modalities

    MathOnco/CellCycle4DataIntegration’s past year of commit activity
    XSLT 0 0 0 0 Updated Jun 21, 2024
  • Lenia-in-HAL Public

    Repository for Lenia framework, implemented in Hybrid Automata Library (HAL)

    MathOnco/Lenia-in-HAL’s past year of commit activity
    Java 6 MIT 0 0 0 Updated Jun 11, 2024
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