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Macos xgboost test fix #86

Macos xgboost test fix

Macos xgboost test fix #86

# This workflow will increment the release version number
# Validates new version
# Publishes to PyPi
# Validates new release
# Publishes to Conda
# Creates new GitHub release
name: Publish Release
on:
push:
branches:
- main
jobs:
release:
if: contains(github.event.head_commit.message, 'bump') && github.actor == 'KulikDM'
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Increment version number
run: |
printf "Reading the current version from the file\n"
current_version=$(grep -oP "__version__ = '\K(\d+\.\d+\.\d+)" pythresh/version.py)
if [[ -z $current_version ]]; then
current_version="0.0.0"
printf "\nIssue fetching current version $current_version\n"
exit 1
fi
printf "\nIncrementing the version number\n"
IFS='.' read -r -a version_parts <<< "$current_version"
patch=$(( ${version_parts[2]} + 1 ))
printf "\nHandling version part overflow\n"
if (( patch > 9 )); then
patch=0
minor=$(( ${version_parts[1]} + 1 ))
if (( minor > 9 )); then
minor=0
major=$(( ${version_parts[0]} + 1 ))
else
major=${version_parts[0]}
fi
else
minor=${version_parts[1]}
major=${version_parts[0]}
fi
new_version="${major}.${minor}.$patch"
printf "\nUpdating the file with the new version number\n"
sed -i "s/__version__ = '${current_version}'/__version__ = '${new_version}'/" pythresh/version.py
echo "new_version=$new_version" >> $GITHUB_ENV
echo "WORK_DIR=$(pwd)" >> $GITHUB_ENV
printf "\nNew version updated from $current_version to $new_version\n"
- name: Validate new PyPi version
run: |
printf "Getting lastest pypi information\n"
url="https://pypi.org/pypi/pythresh/json"
current_pypi_version=$(curl -s "$url" | jq -r '.info.version')
printf "\nValidating version update\n"
if [ "$current_pypi_version" == "${{ env.new_version }}" ]; then
printf "\nCurrent PyPi version $current_pypi_version matches ${{ env.new_version }}\n"
exit 1
fi
printf "\nNew version validated\n"
- name: Commit and push changes
env:
GIT_USER: ${{ secrets.GIT_USER }}
GIT_EMAIL: ${{ secrets.GIT_EMAIL }}
GIT_TOKEN: ${{ secrets.GIT_TOKEN }}
run: |
printf "Preparing to commit\n"
git config --global user.name $GIT_USER
git config --global user.email $GIT_EMAIL
git commit -a -m "Updated to version ${{ env.new_version }}"
printf "\nPushing the changes to the repository\n"
git push origin main
printf "\nNew version commited\n"
sleep 1m
- name: Publish to PyPI
env:
TWINE_USERNAME: __token__
TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }}
run: |
printf "Preparing to install dependancies\n"
python -m pip install --upgrade pip setuptools wheel twine
python setup.py sdist
printf "\nPackage created locally\n"
twine upload dist/*
printf "\nNew PyPi release created\n"
sleep 10m
- name: Validate new Conda version
run: |
printf "Getting lastest pypi information\n"
url="https://pypi.org/pypi/pythresh/json"
latest_version=$(curl -s "$url" | jq -r '.info.version')
latest_sha256=$(curl -s "$url" | jq -r '.releases."'"$latest_version"'"[0].digests."sha256"')
echo "Validating version update"
if [ "$latest_version" != "${{ env.new_version }}" ]; then
printf "\nNew Conda version $latest_version does not match new PyPi version ${{ env.new_version }}\n"
exit 1
fi
echo "latest_version=$latest_version" >> $GITHUB_ENV
echo "latest_sha256=$latest_sha256" >> $GITHUB_ENV
printf "\nNew PyPi version validated\n"
- name: Update Conda feedstock repository
env:
GIT_USER: ${{ secrets.GIT_USER }}
GIT_EMAIL: ${{ secrets.GIT_EMAIL }}
GIT_TOKEN: ${{ secrets.GIT_TOKEN }}
run: |
printf "Preparing to clone feedstock repository\n"
git config --global user.name $GIT_USER
git config --global user.email $GIT_EMAIL
git clone https://$GIT_USER:$GIT_TOKEN@github.com/conda-forge/pythresh-feedstock.git
cd pythresh-feedstock
printf "\nReading the original meta.yaml file\n"
meta_yaml=$(cat recipe/meta.yaml)
printf "\nUpdating the version and sha256\n"
updated_meta_yaml=$(echo "{% set name = \"pythresh\" %}" && echo "{% set version = \"${{ env.latest_version }}\" %}" && tail -n +3 recipe/meta.yaml | sed -E "s/sha256: .*$/sha256: ${{ env.latest_sha256 }}/")
printf "\nWriting the updated meta.yaml file\n"
echo "$updated_meta_yaml" > recipe/meta.yaml
printf "\nCommitting the changes\n"
git add recipe/meta.yaml
git commit -m "Update to version ${{ env.latest_version }}"
printf "\nPushing the changes to the repository"
git push origin main
printf "\nNew Conda release created\n"
- name: Create GitHub release
env:
GIT_TOKEN: ${{ secrets.GIT_TOKEN }}
run: |
printf "Preparing to create new GitHub release\n"
cd "${{ env.WORK_DIR }}"
TAG_NAME="v${{ env.latest_version }}"
RELEASE_TITLE=$TAG_NAME
printf "\nCreating release notes\n"
RELEASE_NOTES="## What's Changed"$'\n'
while IFS= read -r line; do
RELEASE_NOTES+="* $line"$'\n'
done < <(grep -A 1 "v<${{ env.latest_version }}>," CHANGES.txt | grep -o -- "-- .*" | sed -e "s/^-- //")
RELEASE_NOTES=$(echo "$RELEASE_NOTES" | sed -E ':a;N;$!ba;s/\r{0,1}\n/\\n/g')
printf "\nPosting new release\n"
JSON_DATA="{ \"tag_name\": \"$TAG_NAME\", \"name\": \"$RELEASE_TITLE\", \"body\": \"$RELEASE_NOTES\", \"draft\": false, \"prerelease\": false }"
curl -X POST "https://api.github.com/repos/KulikDM/pythresh/releases" \
-H "Content-Type: application/json" \
-H "Authorization: Bearer $GIT_TOKEN" \
-d "$JSON_DATA"
printf "\nNew release posted succesfully\n"