update deps

GenomicMedLab · Oct 5, 2023 · 1894458 · 1894458
1 parent ad8febf
commit 1894458
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Showing 2 changed files with 6 additions and 4 deletions.
diff --git a/Pipfile b/Pipfile
@@ -11,11 +11,11 @@ pyliftover = "*"
 pandas = "*"
 hgvs = "*"
 "biocommons.seqrepo" = "*"
-pydantic = "==2.1.1"
+pydantic = "*"
 fastapi = "*"
 uvicorn = "*"
-gene-normalizer = {editable = true, path = "cancervariants/gene-normalization"}
-"ga4gh.vrs" = {editable = true, path = "ga4gh/vrs-python"}
+gene-normalizer = ">=0.1.40.dev1, != 0.2.0, != 0.2.1, != 0.2.2, != 0.2.3, != 0.2.4, != 0.2.5, != 0.2.6, != 0.2.7, != 0.2.8, != 0.2.9, != 0.2.10"
+"ga4gh.vrs" = "*"
 
 [dev-packages]
 cool_seq_tool = {editable = true, path = "."}

diff --git a/setup.cfg b/setup.cfg
@@ -20,9 +20,11 @@ install_requires =
     pandas
     hgvs
     biocommons.seqrepo
-    pydantic == 2.1.1
+    pydantic
     uvicorn
     fastapi
+    gene-normalizer >=0.1.40.dev1, != 0.2.0, != 0.2.1, != 0.2.2, != 0.2.3, != 0.2.4, != 0.2.5, != 0.2.6, != 0.2.7, != 0.2.8, != 0.2.9, != 0.2.10
+    ga4gh.vrs
 
 [options.package_data]
 cool_seq_tool =