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CHANGELOG.md

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Version 0.6.15

  • Various fixes to Tiff tag metadata

Version 0.6.14

  • Fixed bug in TiffSource legacy loading compressed option

Version 0.6.13

  • Added image check of converted image
  • Added break on error option
  • Various improvements on array data and metadata

Version 0.6.12

  • Simplified dask functions
  • Improved image rendering function including performance
  • Various bug fixes, better tiff metadata handling
  • Experimental code for storing separate tile images as ome-zarr including metadata

Version 0.6.11

  • Restored TiffSource legacy loading compressed / decompress options

Version 0.6.10

  • Simplified rgb source rendering
  • Improved performance of precise resize operation using skimage

Version 0.6.9

  • Combine action now working: combine separate channel images into single multichannel image(s)
  • Multi-dimensional image generator now working (GeneratorSource)
  • Fixed bugs in image conversion, general dask generation, and thumbnails for non-RGB multi-channel images

Version 0.6.8

  • Simplified slicing in source classes
  • Bug fixes in image resizing and dimension orders
  • Pinned some versions in conda envs

Version 0.6.7

  • Fixed bugs in asdask() and GeneratorSource
  • Pinned some versions in pip requirements

Version 0.6.6

  • Rewritten TiffSource using dask/zarr functionality
  • Added high level Dask function
  • Completed Image Generator
  • Improved ome-zarr metadata for napari support

Version 0.6.5

  • Expanded Omero image selection
  • Improved image info format, including pyramid sizes
  • Various bug fixes

Version 0.6.4

  • Fixed bug in TiffSource decoding & indexing

Version 0.6.3

  • Improved Dask support
  • Fixed minor issue in channel color conversion

Version 0.6.2

  • Added Dask converter for ome.tiff reader

Version 0.6.1

  • Rewritten code base supporting full multi-dimensional images
  • Improved (ome) zarr support
  • Added convenience rgb render function

Version 0.5.3

  • Decoupled hard requirements for Omero / bioformats
  • Minor fixes to ome-zarr metadata

Version 0.5.2

  • Bug fix for new imagecodecs compression naming

Version 0.5.1

  • Added project TOML for publication
  • Various bug fixes

Version 0.4.1

  • Use dictionary to internally store richer channel information
  • Ome metadata fixes

Version 0.4.0

  • Improved support for ome.zarr / NGFF
  • (ome.)zarr lossless/lossy image compression
  • Independent import/export improving import/export image support
  • Use pixel size instead of magnification for scaling
  • Use optimal Omero pixel source pyramid resolution
  • Many metadata fixes
  • Removed channel split support as no use cases
  • Label extraction no longer in image pipeline, use separate script instead

Version 0.3.3

  • Omero class OmeroSource now in line with OmeSource functionality
  • OME metadata now fully implemented using xmltodict
  • Various bug fixes to image/OME metadata

Version 0.3.2

  • Numerous fixes to OME metadata
  • Support volumetric images

Version 0.3.1

  • Refactored Source classes
  • Added bare bones Ome Zarr support