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Merge pull request #275 from ENCODE-DCC/dev
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hotfix fix py2 shebang
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leepc12 authored Mar 25, 2022
2 parents e856124 + eb46b46 commit 1fa4734
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Showing 2 changed files with 7 additions and 7 deletions.
12 changes: 6 additions & 6 deletions chip.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -7,10 +7,10 @@ struct RuntimeEnvironment {
}

workflow chip {
String pipeline_ver = 'v2.1.5'
String pipeline_ver = 'v2.1.6'

meta {
version: 'v2.1.5'
version: 'v2.1.6'

author: 'Jin wook Lee'
email: 'leepc12@gmail.com'
Expand All @@ -19,8 +19,8 @@ workflow chip {

specification_document: 'https://docs.google.com/document/d/1lG_Rd7fnYgRpSIqrIfuVlAz2dW1VaSQThzk836Db99c/edit?usp=sharing'

default_docker: 'encodedcc/chip-seq-pipeline:v2.1.5'
default_singularity: 'https://encode-pipeline-singularity-image.s3.us-west-2.amazonaws.com/chip-seq-pipeline_v2.1.5.sif'
default_docker: 'encodedcc/chip-seq-pipeline:v2.1.6'
default_singularity: 'https://encode-pipeline-singularity-image.s3.us-west-2.amazonaws.com/chip-seq-pipeline_v2.1.6.sif'
croo_out_def: 'https://storage.googleapis.com/encode-pipeline-output-definition/chip.croo.v5.json'

parameter_group: {
Expand Down Expand Up @@ -71,8 +71,8 @@ workflow chip {
}
input {
# group: runtime_environment
String docker = 'encodedcc/chip-seq-pipeline:v2.1.5'
String singularity = 'https://encode-pipeline-singularity-image.s3.us-west-2.amazonaws.com/chip-seq-pipeline_v2.1.5.sif'
String docker = 'encodedcc/chip-seq-pipeline:v2.1.6'
String singularity = 'https://encode-pipeline-singularity-image.s3.us-west-2.amazonaws.com/chip-seq-pipeline_v2.1.6.sif'
String conda = 'encode-chip-seq-pipeline'
String conda_macs2 = 'encode-chip-seq-pipeline-macs2'
String conda_spp = 'encode-chip-seq-pipeline-spp'
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2 changes: 1 addition & 1 deletion src/assign_multimappers.py
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/usr/bin/env python2
#!/usr/bin/env python3

# piped script to take multimappers and randomly assign
# requires a qname sorted file!!
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