Adds coolbox for genome track plots #35
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| name: Create and publish a Docker image | |
| on: | |
| push: | |
| branches: main | |
| paths-ignore: | |
| - 'LICENSE' | |
| - 'README.md' | |
| - '.github/workflows/build-deploy-cuda.yml' | |
| release: | |
| types: [published] | |
| env: | |
| REGISTRY: ghcr.io | |
| IMAGE_NAME: ${{ github.repository }} | |
| jobs: | |
| build-and-push-pyimage: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: linux/amd64,linux/arm64 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Log in to the Container registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ${{ env.REGISTRY }} | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Extract metadata (tags, labels) for Docker | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }} | |
| flavor: | | |
| suffix=-py,onlatest=true | |
| tags: | | |
| type=raw,value=latest,enable={{is_default_branch}} | |
| type=raw,value={{date 'YYYY'}},enable={{is_default_branch}} | |
| type=semver,pattern={{major}}.{{minor}}.{{patch}} | |
| type=semver,pattern={{major}}.{{minor}} | |
| type=semver,pattern={{major}} | |
| labels: | | |
| org.opencontainers.image.description=Combines the Docker Stacks tensorflow-notebook and pytorch-notebook containers plus jupytext and custom package additions. | |
| annotations: | | |
| org.opencontainers.image.description=Combines the Docker Stacks tensorflow-notebook and pytorch-notebook containers plus jupytext and custom package additions. | |
| - name: Build and push Python-only Docker image | |
| uses: docker/build-push-action@v6 | |
| with: | |
| context: . | |
| file: Dockerfile-pyonly | |
| push: true | |
| platforms: linux/amd64,linux/arm64 | |
| tags: ${{ steps.meta.outputs.tags }} | |
| labels: ${{ steps.meta.outputs.labels }} | |
| annotations: ${{ steps.meta.outputs.annotations }} | |
| cache-to: type=gha,mode=max | |
| cache-from: type=gha | |
| build-and-push-image-withR: | |
| runs-on: ubuntu-latest | |
| needs: build-and-push-pyimage | |
| permissions: | |
| contents: read | |
| packages: write | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Log in to the Container registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ${{ env.REGISTRY }} | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Extract metadata (tags, labels) for Docker | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }} | |
| tags: | | |
| type=raw,value=latest,enable={{is_default_branch}} | |
| type=raw,value={{date 'YYYY'}},enable={{is_default_branch}} | |
| type=semver,pattern={{major}}.{{minor}}.{{patch}} | |
| type=semver,pattern={{major}}.{{minor}} | |
| type=semver,pattern={{major}} | |
| labels: | | |
| org.opencontainers.image.description=Combines the Docker Stacks tensorflow-notebook, pytorch-notebook, and r-notebook containers plus jupytext and custom package additions. | |
| - name: Build and push Docker image | |
| uses: docker/build-push-action@v6 | |
| with: | |
| context: . | |
| push: true | |
| tags: ${{ steps.meta.outputs.tags }} | |
| labels: ${{ steps.meta.outputs.labels }} | |
| cache-to: type=gha,mode=max | |
| cache-from: type=gha |