Update terra-jupyter-aou to Hail version 0.2.122

DataBiosphere · Sep 7, 2023 · b69aa07 · b69aa07
1 parent 48ff40c
commit b69aa07
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Showing 3 changed files with 16 additions and 23 deletions.
diff --git a/config/conf.json b/config/conf.json
@@ -83,9 +83,7 @@
             "tools" : [
                 "python"
             ],
-            "packages" : {
-
-            },
+            "packages" : {},
             "version" : "1.1.1",
             "automated_flags" : {
                 "generate_docs" : true,
@@ -101,9 +99,7 @@
             "tools" : [
                 "r"
             ],
-            "packages" : {
-
-            },
+            "packages" : {},
             "version" : "2.2.1",
             "automated_flags" : {
                 "include_in_ui" : false,
@@ -121,9 +117,7 @@
                 "python",
                 "r"
             ],
-            "packages" : {
-
-            },
+            "packages" : {},
             "version" : "2.3.1",
             "automated_flags" : {
                 "include_in_ui" : true,
@@ -140,10 +134,8 @@
                 "python",
                 "r"
             ],
-            "packages" : {
-
-            },
-            "version" : "2.2.1",
+            "packages" : {},
+            "version" : "2.2.2",
             "automated_flags" : {
                 "include_in_ui" : false,
                 "generate_docs" : false,
@@ -158,9 +150,7 @@
             "tools" : [
                 "r"
             ],
-            "packages" : {
-
-            },
+            "packages" : {},
             "version" : "0.1.1",
             "automated_flags" : {
                 "include_in_ui" : false,
@@ -173,11 +163,8 @@
         {
             "name" : "wondershaper",
             "base_label" : "wondershaper",
-            "tools" : [
-            ],
-            "packages" : {
-
-            },
+            "tools" : [],
+            "packages" : {},
             "version" : "0.0.1",
             "automated_flags" : {
                 "include_in_ui" : false,
@@ -188,4 +175,4 @@
             }
         }
     ]
-}
+}
diff --git a/terra-jupyter-aou/CHANGELOG.md b/terra-jupyter-aou/CHANGELOG.md
@@ -1,3 +1,9 @@
+## 2.2.2 - 2023-09-07
+- Update `hail` to `0.2.122`
+  - See https://hail.is/docs/0.2/change_log.html#version-0-2-122) for details
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-aou:2.2.2`
+
 ## 2.2.1 - 2023-07-28
 
 - Fix bug introduced in https://github.com/DataBiosphere/terra-docker/commit/4a5b4c9212aedcafa2f41fbeb2b161089341c578 

diff --git a/terra-jupyter-aou/Dockerfile b/terra-jupyter-aou/Dockerfile
@@ -47,7 +47,7 @@ ENV PYTHONPATH $PYTHONPATH:/usr/lib/spark/python
 
 ENV PYSPARK_PYTHON=python3
 
-ENV HAIL_VERSION=0.2.120
+ENV HAIL_VERSION=0.2.122
 
 RUN find $JUPYTER_HOME/scripts -name '*.sh' -type f | xargs chmod +x \
     && $JUPYTER_HOME/scripts/kernel/kernelspec.sh $JUPYTER_HOME/scripts/kernel /opt/conda/share/jupyter/kernels \