more docs formatting fixes

CSBiology · May 14, 2024 · 2e2262e · 2e2262e
1 parent 5de60b6
commit 2e2262e
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Showing 2 changed files with 29 additions and 35 deletions.
diff --git a/docs/core/biocollections.ipynb b/docs/core/biocollections.ipynb
@@ -14,7 +14,7 @@
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+   "execution_count": null,
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@@ -23,17 +23,7 @@
      "kernelName": "fsharp"
     }
    },
-   "outputs": [
-    {
-     "data": {
-      "text/html": [
-       "<div><div></div><div></div><div><strong>Installed Packages</strong><ul><li><span>FSharp.Stats, 0.4.11</span></li><li><span>FSharpAux, 2.0.0</span></li><li><span>FSharpAux.IO, 2.0.0</span></li><li><span>Plotly.NET, 4.2.0</span></li></ul></div></div>"
-      ]
-     },
-     "metadata": {},
-     "output_type": "display_data"
-    }
-   ],
+   "outputs": [],
    "source": [
     "(*** hide ***)\n",
     "\n",
@@ -67,7 +57,7 @@
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-   "execution_count": 6,
+   "execution_count": 2,
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@@ -87,7 +77,7 @@
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-   "execution_count": 10,
+   "execution_count": 3,
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@@ -163,7 +153,7 @@
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+   "execution_count": 4,
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@@ -200,7 +190,7 @@
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+   "execution_count": 5,
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@@ -237,7 +227,7 @@
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+   "execution_count": 6,
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@@ -278,7 +268,7 @@
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+   "execution_count": 7,
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@@ -318,7 +308,7 @@
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+   "execution_count": 8,
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@@ -348,7 +338,7 @@
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-   "execution_count": 18,
+   "execution_count": 9,
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@@ -376,7 +366,7 @@
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-   "execution_count": 19,
+   "execution_count": 10,
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@@ -404,7 +394,7 @@
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-   "execution_count": 20,
+   "execution_count": 11,
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@@ -442,7 +432,7 @@
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-   "execution_count": 22,
+   "execution_count": 12,
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@@ -472,7 +462,7 @@
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-   "execution_count": 25,
+   "execution_count": 13,
    "metadata": {
     "dotnet_interactive": {
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@@ -500,7 +490,7 @@
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-   "execution_count": 27,
+   "execution_count": 14,
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@@ -566,7 +556,7 @@
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-   "execution_count": 28,
+   "execution_count": 15,
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@@ -602,7 +592,7 @@
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-   "execution_count": 30,
+   "execution_count": 16,
    "metadata": {
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@@ -674,7 +664,7 @@
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-   "execution_count": 31,
+   "execution_count": 17,
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diff --git a/docs/index.ipynb b/docs/index.ipynb
@@ -24,7 +24,11 @@
     "#r \"../src/BioFSharp.IO/bin/Release/netstandard2.0/BioFSharp.IO.dll\"\n",
     "#r \"../src/BioFSharp.BioContainers/bin/Release/netstandard2.0/BioFSharp.BioContainers.dll\"\n",
     "#r \"../src/BioFSharp.ML/bin/Release/netstandard2.0/BioFSharp.ML.dll\"\n",
-    "#r \"../src/BioFSharp.Stats/bin/Release/netstandard2.0/BioFSharp.Stats.dll\""
+    "#r \"../src/BioFSharp.Stats/bin/Release/netstandard2.0/BioFSharp.Stats.dll\"\n",
+    "\n",
+    "// in the documentation, we have to register formatters manually because we cannot load the extension as nuget package to trigger automatic registration\n",
+    "#r \"../src/BioFSharp.Interactive/bin/Release/net6.0/BioFSharp.Interactive.dll\"\n",
+    "BioFSharp.Interactive.Formatters.registerAll()"
    ]
   },
   {
@@ -100,7 +104,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 10,
    "metadata": {
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      "language": "fsharp"
@@ -137,7 +141,7 @@
   },
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-   "execution_count": 3,
+   "execution_count": 11,
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@@ -172,7 +176,7 @@
   },
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-   "execution_count": 4,
+   "execution_count": 12,
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@@ -230,7 +234,7 @@
   },
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-   "execution_count": 5,
+   "execution_count": 13,
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@@ -295,7 +299,7 @@
   },
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-   "execution_count": 8,
+   "execution_count": 14,
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@@ -323,7 +327,7 @@
   },
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    "cell_type": "code",
-   "execution_count": 9,
+   "execution_count": 15,
    "metadata": {
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