Releases: BioJulia/BioMakie.jl
Releases · BioJulia/BioMakie.jl
v0.4.1
BioMakie v0.4.1
Needs more work to upgrade to the newest Makie and GLMakie versions. (0.21 and 0.10)
However, BioStructures and MIToS updates work. (0.4 and 0.3)
v0.4.0
BioMakie v0.4.0
Merged pull requests:
- redev (#596) (@kool7d)
- Dev (#597) (@kool7d)
- fix doc links (#598) (@kool7d)
- Update index.md (#599) (@kool7d)
- CompatHelper: bump compat for GLMakie to 0.9, (keep existing compat) (#601) (@github-actions[bot])
- CompatHelper: bump compat for Makie to 0.20, (keep existing compat) (#602) (@github-actions[bot])
- CompatHelper: bump compat for Meshes to 0.37, (keep existing compat) (#604) (@github-actions[bot])
- CompatHelper: bump compat for Hyperscript to 0.0.5, (keep existing compat) (#605) (@github-actions[bot])
- long time no up (#618) (@kool7d)
- BioStructures.jl compat (#622) (@jgreener64)
- Use MIToS v3 (#625) (@diegozea)
- fix meshes compile (#626) (@kool7d)
Contributors
diegozea, jgreener64, and kool7d
Assets 2
v0.3.0
BioMakie v0.3.0
Merged pull requests:
- Dev (#546) (@kool7d)
- Dev (#547) (@kool7d)
- workflows or something? (#548) (@kool7d)
- Dev (#549) (@kool7d)
- protosyn mutation example (#553) (@kool7d)
- big update 1 (#555) (@kool7d)
- Dev (#556) (@kool7d)
- Dev (#557) (@kool7d)
- Dev (#558) (@kool7d)
- ci fix 1 (#559) (@kool7d)
- msatest (#561) (@kool7d)
- docs workflows (#562) (@kool7d)
- Dev (#563) (@kool7d)
- Dev (#564) (@kool7d)
- Dev (#565) (@kool7d)
- project up (#567) (@kool7d)
- add dbinfo gif, rm struc gridpos func (#568) (@kool7d)
- pages md change (#569) (@kool7d)
- docs md tst (#570) (@kool7d)
- Dev (#571) (@kool7d)
- Dev (#572) (@kool7d)
- docs and more (#573) (@kool7d)
- docdeploy (#574) (@kool7d)
- Dev (#575) (@kool7d)
- docdeploy3 (#576) (@kool7d)
- decdeploy4 (#577) (@kool7d)
- docdeploy5 (#578) (@kool7d)
- Delete docs/src/msaselection.jl (#579) (@kool7d)
- Dev (#580) (@kool7d)
- Dev (#581) (@kool7d)
- make.jl sep (#582) (@kool7d)
- docs2 (#583) (@kool7d)
- docs figs (#584) (@kool7d)
- Dev (#585) (@kool7d)
- Dev (#586) (@kool7d)
- Dev (#587) (@kool7d)
- Update README.md (#588) (@kool7d)
- Update runtests.jl (#589) (@kool7d)
- Update Documenter.yml (#590) (@kool7d)
- docs and examples, prep 0.3 (#591) (@kool7d)
- Dev (#592) (@kool7d)
- docs10 (#593) (@kool7d)
- test doc examples and fix (#594) (@kool7d)
- Update Project.toml (#595) (@kool7d)
Closed issues:
- Transfer to BioJulia? (#550)
Contributors
kool7d
Assets 2
v0.2.3
BioMakie v0.2.3
Merged pull requests:
- Dev (#523) (@kool7d)
- Update ci.yml (#524) (@kool7d)
- CompatHelper: bump compat for Meshes to 0.29, (keep existing compat) (#525) (@github-actions[bot])
- Dev (#529) (@kool7d)
- Dev-Update Project.jl (#530) (@kool7d)
- Dev (#534) (@kool7d)
- tests and fix doc img (#535) (@kool7d)
- structure filename (#536) (@kool7d)
- Dev (#537) (@kool7d)
- Dev (#538) (@kool7d)
- docs again 2 (#539) (@kool7d)
- Dev (#540) (@kool7d)
- tweak kwargs (#541) (@kool7d)
- fix project (#542) (@kool7d)
- Dev (#545) (@kool7d)
Contributors
kool7d
Assets 2
v0.2.2
BioMakie v0.2.2
Merged pull requests:
- docs minor (#457) (@kool7d)
- CompatHelper: add new compat entry for Transducers at version 0.4, (keep existing compat) (#458) (@github-actions[bot])
- CompatHelper: bump compat for HTTP to 1, (keep existing compat) (#460) (@github-actions[bot])
- CompatHelper: bump compat for FASTX to 2, (keep existing compat) (#462) (@github-actions[bot])
- CompatHelper: bump compat for Meshes to 0.24, (keep existing compat) (#463) (@github-actions[bot])
- revive (#464) (@kool7d)
- CompatHelper: add new compat entry for Makie at version 0.18, (keep existing compat) (#467) (@github-actions[bot])
- CompatHelper: bump compat for MolecularGraph to 0.12, (keep existing compat) (#468) (@github-actions[bot])
- Dev (#473) (@kool7d)
- update project (#474) (@kool7d)
- Update Project.toml (#475) (@kool7d)
- add colors, remove utils, update project (#478) (@kool7d)
- Dev (#483) (@kool7d)
- MIToS PDB struc, finish bonds (#493) (@kool7d)
- Dev (#499) (@kool7d)
- CompatHelper: add new compat entry for Meshes at version 0.27, (keep existing compat) (#500) (@github-actions[bot])
- better docstrings and struc update (#502) (@kool7d)
- devup (#503) (@kool7d)
- Dev (#506) (@kool7d)
- tweak1 (#508) (@kool7d)
- Dev (#511) (@kool7d)
- msa and docs (#512) (@kool7d)
- docs markdown (#513) (@kool7d)
- Dev (#515) (@kool7d)
- docs figs (#516) (@kool7d)
- Dev (#517) (@kool7d)
- change ci (#518) (@kool7d)
- MolGraph version (#519) (@kool7d)
- CI workflow (#520) (@kool7d)
- Update README.md (#521) (@kool7d)
- readme2 (#522) (@kool7d)
Contributors
kool7d
Assets 2
v0.2.1
BioMakie v0.2.1
Merged pull requests:
- CompatHelper: bump compat for "PairwiseListMatrices" to "0.9" (#204) (@github-actions[bot])
- CompatHelper: bump compat for "HTTP" to "0.9" (#206) (@github-actions[bot])
- CompatHelper: bump compat for "AbstractPlotting" to "0.17" (#207) (@github-actions[bot])
- Bump actions/checkout from 2 to 2.3.4 (#217) (@dependabot[bot])
- Bump codecov/codecov-action from 1 to 1.5.0 (#218) (@dependabot[bot])
- Bump JuliaRegistries/TagBot from 1 to 1.13.1 (#220) (@dependabot[bot])
- Dev (#230) (@kool7d)
- working1 (#272) (@kool7d)
- Update dev (#273) (@kool7d)
- CompatHelper: add new compat entry for "GeometryBasics" at version "0.4" (#351) (@github-actions[bot])
- updep1 (#352) (@kool7d)
- Merge pull request #352 from kool7d/master (#353) (@kool7d)
- Dev (#354) (@kool7d)
- sw1 (#355) (@kool7d)
- Dev (#356) (@kool7d)
- Dev (#357) (@kool7d)
- up2 (#358) (@kool7d)
- Update README.md (#359) (@kool7d)
- Bump JuliaRegistries/TagBot from 1.13.1 to 1.14 (#360) (@dependabot[bot])
- CompatHelper: add new compat entry for "LiveServer" at version "0.7" (#361) (@github-actions[bot])
- CompatHelper: add new compat entry for "PlutoUI" at version "0.7" (#362) (@github-actions[bot])
- CompatHelper: add new compat entry for "Pluto" at version "0.15" (#363) (@github-actions[bot])
- Dev (#364) (@kool7d)
- docc2 (#365) (@kool7d)
- CompatHelper: add new compat entry for ComponentArrays at version 0.11, (keep existing compat) (#366) (@github-actions[bot])
- CompatHelper: bump compat for Meshes to 0.17, (keep existing compat) (#367) (@github-actions[bot])
- CompatHelper: add new compat entry for StaticArrays at version 1, (keep existing compat) (#368) (@github-actions[bot])
- CompatHelper: bump compat for MolecularGraph to 0.10, (keep existing compat) (#369) (@github-actions[bot])
- Bump codecov/codecov-action from 1.5.0 to 2.0.3 (#370) (@dependabot[bot])
- CompatHelper: add new compat entry for Meshing at version 0.5, (keep existing compat) (#371) (@github-actions[bot])
- in1 (#372) (@kool7d)
- in2 (#373) (@kool7d)
- CompatHelper: bump compat for Pluto to 0.16, (keep existing compat) (#374) (@github-actions[bot])
- Bump codecov/codecov-action from 2.0.3 to 2.1.0 (#375) (@dependabot[bot])
- CompatHelper: bump compat for MolecularGraph to 0.11, (keep existing compat) (#376) (@github-actions[bot])
- Dev (#377) (@kool7d)
- Dev (#378) (@kool7d)
- Dev (#379) (@kool7d)
- merg (#380) (@kool7d)
- CompatHelper: add new compat entry for DocumenterTools at version 0.1, (keep existing compat) (#381) (@github-actions[bot])
- Dev (#382) (@kool7d)
- CompatHelper: bump compat for GraphMakie to 0.3, (keep existing compat) (#383) (@github-actions[bot])
- CompatHelper: bump compat for Pluto to 0.17, (keep existing compat) (#384) (@github-actions[bot])
- CompatHelper: bump compat for Underscores to 3, (keep existing compat) (#385) (@github-actions[bot])
- Dev (#386) (@kool7d)
- CompatHelper: add new compat entry for Conda at version 1, (keep existing compat) (#387) (@github-actions[bot])
- CompatHelper: add new compat entry for PyCall at version 1, (keep existing compat) (#388) (@github-actions[bot])
- CompatHelper: bump compat for Meshes to 0.18, (keep existing compat) (#389) (@github-actions[bot])
- msdev1 (#390) (@kool7d)
- Merge pull request #390 from kool7d/master (#391) (@kool7d)
- ms1 (#392) (@kool7d)
- CompatHelper: bump compat for Meshes to 0.19, (keep existing compat) (#393) (@github-actions[bot])
- Dev (#394) (@kool7d)
- CompatHelper: bump compat for BioSequences to 3, (keep existing compat) (#395) (@github-actions[bot])
- CompatHelper: bump compat for Makie to 0.16, (keep existing compat) (#396) (@github-actions[bot])
- CompatHelper: bump compat for WGLMakie to 0.5, (keep existing compat) (#397) (@github-actions[bot])
- CompatHelper: bump compat for CairoMakie to 0.7, (keep existing compat) (#398) (@github-actions[bot])
- CompatHelper: bump compat for GLMakie to 0.5, (keep existing compat) (#399) (@github-actions[bot])
- CompatHelper: bump compat for Pluto to 0.18, (keep existing compat) (#400) (@github-actions[bot])
- CompatHelper: bump compat for Meshes to 0.21, (keep existing compat) (#402) (@github-actions[bot])
- mastertodev (#403) (@kool7d)
- Dev (#404) (@kool7d)
- Dev (#433) (@kool7d)
- Dev (#444) (@kool7d)
- Dev (#450) (@kool7d)
- CompatHelper: add new compat entry for FASTX at version 1, (keep existing compat) (#451) (@github-actions[bot])
- docclean1 (#452) (@kool7d)
- Update README.md (#453) (@kool7d)
- Dev (#454) (@kool7d)
- Dev (#455) (@kool7d)
- Update LICENSE (#456) (@kool7d)
Contributors
kool7d and dependabot
Assets 2
v0.2.0
BioMakie v0.2.0
Merged pull requests:
- Dev (#1) (@kool7d)
- 3/15/20-1: formatting (#2) (@kool7d)
- Some package additions and testing. (#3) (@kool7d)
- Starting to add some data and examples. (#4) (@kool7d)
- Dev (#5) (@kool7d)
- Dev (#6) (@kool7d)
- Dev (#7) (@kool7d)
- Tetherss (#8) (@kool7d)
- fdgd (#9) (@kool7d)
- iuoui (#10) (@kool7d)
- Dev (#11) (@kool7d)
- Dev (#12) (@kool7d)
- Dev (#13) (@kool7d)
- Dev (#14) (@kool7d)
- Fix display bugs, reorganize. (#15) (@kool7d)
- Things almost work properly... (#16) (@kool7d)
- majorupdate (#17) (@kool7d)
- Dev (#18) (@kool7d)
- compats (#19) (@kool7d)
- compats try 2 (#40) (@kool7d)
- CompatHelper: add new compat entry for "WGLMakie" at version "0.2" (#42) (@github-actions[bot])
- c3 (#43) (@kool7d)
- CompatHelper: add new compat entry for "JSServe" at version "0.6" (#44) (@github-actions[bot])
- c4 (#45) (@kool7d)
- Merge pull request #45 from kool7d/dev (#46) (@kool7d)
- Dev (#47) (@kool7d)
- c6 (#48) (@kool7d)
- c6 (#49) (@kool7d)
- c7 (#50) (@kool7d)
- c8 (#51) (@kool7d)
- Big fix (#52) (@kool7d)
- tst1 (#54) (@kool7d)
- CompatHelper: bump compat for "AbstractPlotting" to "0.12" (#55) (@github-actions[bot])
- msa working. (#56) (@kool7d)
- CompatHelper: bump compat for "DataStructures" to "0.18" (#57) (@github-actions[bot])
- Dev (#58) (@kool7d)
- up3 (#59) (@kool7d)
- CompatHelper: add new compat entry for "Phylo" at version "0.4" (#60) (@github-actions[bot])
- CompatHelper: add new compat entry for "LightGraphs" at version "1.3" (#61) (@github-actions[bot])
- CompatHelper: add new compat entry for "NetworkLayout" at version "0.2" (#62) (@github-actions[bot])
- CompatHelper: add new compat entry for "FillArrays" at version "0.9" (#63) (@github-actions[bot])
- Dev (#64) (@kool7d)
- Dev (#65) (@kool7d)
- up5 (#66) (@kool7d)
- Dev (#67) (@kool7d)
- CompatHelper: add new compat entry for "Documenter" at version "0.25" (#68) (@github-actions[bot])
- CompatHelper: add new compat entry for "Literate" at version "2.6" (#69) (@github-actions[bot])
- allmerge (#70) (@kool7d)
- CompatHelper: bump compat for "GeometryBasics" to "0.3" (#71) (@github-actions[bot])
- Dev (#72) (@kool7d)
- Configure docs ready for Travis (#73) (@Libbum)
- Dev (#74) (@kool7d)
- CompatHelper: add new compat entry for "GLFW" at version "3.4" (#75) (@github-actions[bot])
- CompatHelper: add new compat entry for "PkgTemplates" at version "0.7" (#76) (@github-actions[bot])
- CompatHelper: add new compat entry for "GLMakie" at version "0.1" (#77) (@github-actions[bot])
- CompatHelper: add new compat entry for "WGLMakie" at version "0.2" (#78) (@github-actions[bot])
- CompatHelper: add new compat entry for "Franklin" at version "0.9" (#79) (@github-actions[bot])
- CompatHelper: bump compat for "JLD2" to "0.2" (#80) (@github-actions[bot])
- Big merge and switch (#81) (@kool7d)
- Merge pull request #81 from kool7d/master (#82) (@kool7d)
- Merge pull request #82 from kool7d/dev (#83) (@kool7d)
- Merge pull request #83 from kool7d/master (#84) (@kool7d)
- Revert "Merge pull request #83 from kool7d/master" (#85) (@kool7d)
- mdmerge (#86) (@kool7d)
- CompatHelper: add new compat entry for "PkgPage" at version "0.3" (#87) (@github-actions[bot])
- CompatHelper: add new compat entry for "NodeJS" at version "1.1" (#88) (@github-actions[bot])
- Dev (#89) (@kool7d)
- hsh2 (#90) (@kool7d)
- dev-master1 (#91) (@kool7d)
- Dev (#92) (@kool7d)
- newdeploy2 (#93) (@kool7d)
- Dev (#94) (@kool7d)
- m1 (#95) (@kool7d)
- Merge pull request #95 from kool7d/master (#96) (@kool7d)
- Merge pull request #96 from kool7d/dev (#97) (@kool7d)
- Merge pull request #97 from kool7d/master (#98) (@kool7d)
- Merge pull request #98 from kool7d/dev (#99) (@kool7d)
- Dev (#100) (@kool7d)
- CompatHelper: add new compat entry for "AbstractPlotting" at version "0.12" (#101) (@github-actions[bot])
- CompatHelper: bump compat for "Franklin" to "0.10" (#102) (@github-actions[bot])
- CompatHelper: bump compat for "Distances" to "0.10" (#103) (@github-actions[bot])
- CompatHelper: add new compat entry for "Documenter" at version "0.25" (#104) (@github-actions[bot])
- CompatHelper: bump compat for "Distances" to "0.10" (#105) (@github-actions[bot])
- Bump webfactory/ssh-agent from v0.2.0 to v0.4.1 (#106) (@dependabot[bot])
- Bump actions/checkout from v2.3.1 to v2.3.3 (#107) (@dependabot[bot])
- CompatHelper: bump compat for "NetworkLayout" to "0.3" (#109) (@github-actions[bot])
- Bump JamesIves/github-pages-deploy-action from 3.6.2 to 3.7.1 (#110) (@dependabot[bot])
- CompatHelper: add new compat entry for "Makie" at version "0.11" (#111) (@github-actions[bot])
- CompatHelper: bump compat for "AbstractPlotting" to "0.13" (#112) (@github-actions[bot])
- CompatHelper: bump compat for "FillArrays" to "0.10" (#113) (@github-actions[bot])
- Bump actions/checkout from v2.3.3 to v2.3.4 (#114) (@dependabot[bot])
- CompatHelper: bump compat for "AbstractPlotting" to "0.14" (#116) (@github-actions[bot])
- CompatHelper: bump compat for "Documenter" to "0.26" (#117) (@github-actions[bot])
- CompatHelper: bump compat for "JSServe" to "1.1" (#121) (@github-actions[bot])
- Big Dev (#122) (@kool7d)
- Dev (#123) (@kool7d)
- Dev (#124) (@kool7d)
- retest2 (#125) (@kool7d)
- Dev (#126) (@kool7d)
- structure uncommented (#127) (@kool7d)
- Bump JamesIves/github-pages-deploy-action from 3.7.1 to 4.0.0 (#128) (@dependabot[bot])
- s1 (#129) (@kool7d)
- s2 (#130) (@kool7d)
- m1 (#131) (@kool7d)
- Merge pull request #131 from kool7d/master (#132) (@kool7d)
- Merge pull request #132 from kool7d/dev (#133) (@kool7d)
- Dev (#134) (@kool7d)
- ndocs3 (#135) (@kool7d)
- ndocs4 (#136) (@kool7d)
- CompatHelper: add new compat entry for "ColorSchemes" at version "3.10" (#137) (@github-actions[bot])
- CompatHelper: add new compat entry for "Documenter" at version "0.26" (#138) (@github-actions[bot])
- CompatHelper: add new compat entry for "MIToS" at version "2.5" (#139) (@github-actions[bot])
- CompatHelper: add new compat entry for "Pluto" at version "0.12" (#140) (@github-actions[bot])
- CompatHelper: add new compat entry for "Distances" at version "0.10" (#141) (@github-actions[bot])
- CompatHelper: add new compat entry for "GLMakie" at version "0.1" (#142) (@github-actions[bot])
- CompatHelper: add new compat entry for "GLFW" at version "3.4" (#143) (@github-actions[bot])
- CompatHelper: add new compat entry for "Literate" at version "2.8" (#144) (@github-actions[bot])
- CompatHelper: add new compat entry for "GeometryBasics" at version "0.3" (#145) (@github-actions[bot])
- CompatHelper: add new compat entry for "BioSequences" at version "2.0" (#146) (@github-actions[bot])
- CompatHelper: add new compat entry for "Colors" at version "0.12" (#147) (@github-actions[bot])
- CompatHelper: add new compat entry for "DrWatson" at version "1.18" (#148) (@github-actions[bot])
- CompatHelper: add new compat entry for "PairwiseListMatrices" at version "0.8" (#149) (@github-actions[bot])
- CompatHelper: add new compat entry for "DataStructures" at version "0.18" (#150) (@github-actions[bot])
- CompatHelper: add new compat entry for "WGLMakie" at version "0.3" (#151) (@github-actions[bot])
- CompatHelper: add new compat entry for "CommonSubexpressions" at version "0.3" (#152) (@github-actions[bot])
- CompatHelper: add new compat entry for "TensorCast" at version "0.3" (#153) (@github-actions[bot])
- CompatHelper: add new compat entry for "TableTraitsUtils" at version "1.0" (#154) (@github-actions[bot])
- CompatHelper: add new compat entry for "Parameters" at version "0.12" (#155) (@github-actions[bot])
- CompatHelper: add new compat entry for "CUDA" at version "2.6" (#156) (@github-actions[bot])
- CompatHelper: add new compat entry for "Distributions" at version "0.24" (#157) (@github-actions[bot])
- CompatHelper: add new compat entry for "BioStructures" at version "0.11" (#158) (@github-actions[bot])
- CompatHelper: add new compat entry for "FileIO" at version "1.4" (#159) (@github-actions[bot])
- CompatHelper: add new compat entry for "JSServe" at version "1.2" (#160) (@github-actions[bot])
- CompatHelper: add new compat entry for "AbstractPlotting" at version "0.15" (#161) (@github-actions[bot])
- CompatHelper: add new compat entry for "Observables" at version "0.3" (#162) (@github-actions[bot])
- CompatHelper: add new compat entry for "FastaIO" at version "1.0" (#163) (@github-actions[bot])
- CompatHelper: add new compat entry for "SplitApplyCombine" at version "1.1" (#164) (@github-actions[bot])
- Bump webfactory/ssh-agent from v0.4.1 to v0.5.0 (#165) (@dependabot[bot])
- Dev (#166) (@kool7d)
- CompatHelper: add new compat entry for "DataFrames" at version "0.22" (#167) (@github-actions[bot])
- CompatHelper: bump compat for "Observables" to "0.4" (#168) (@github-actions[bot])
- CompatHelper: add new compat entry for "PlutoUI" at version "0.7" (#169) (@github-actions[bot])
- CompatHelper: add new compat entry for "Hyperscript" at version "0.0.4" (#170) (@github-actions[bot])
- CompatHelper: add new compat entry for "OrderedCollections" at version "1.4" (#171) (@github-actions[bot])
- CompatHelper: add new compat entry for "Distances" at version "0.10" (#172) (@github-actions[bot])
- Bump JamesIves/github-pages-deploy-action from 4.0.0 to 4.1.0 (#173) (@dependabot[bot])
- CompatHelper: bump compat for "DrWatson" to "2.0" (#174) (@github-actions[bot])
- Use dev (#175) (@kool7d)
- CompatHelper: bump compat for "GLMakie" to "0.2" (#178) (@github-actions[bot])
- CompatHelper: bump compat for "TensorCast" to "0.4" (#179) (@github-actions[bot])
- Bump JamesIves/github-pages-deploy-action from 4.1.0 to 4.1.1 (#180) (@dependabot[bot])
- Dev (#181) (@kool7d)
- Dev (#185) (@kool7d)
- bu4 (#186) (@kool7d)
- Bump actions/cache from v1 to v2.1.4 (#187) (@dependabot[bot])
- Bump actions/cache from v2.1.4 to v2.1.5 (#203) (@dependabot[bot])
