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feat: create Snakemake report #12

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mkatsanto opened this issue Mar 1, 2021 · 4 comments
Open

feat: create Snakemake report #12

mkatsanto opened this issue Mar 1, 2021 · 4 comments
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future will not be fixed for NOW

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@mkatsanto
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Describe the solution you'd like
Implement in run/snakemake.py

Additional context
Snakemake API: https://snakemake.readthedocs.io/en/stable/api_reference/snakemake.html
@mkatsanto
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https://git.scicore.unibas.ch/zavolan_group/pipelines/zarp/-/issues/130

@mkatsanto
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https://git.scicore.unibas.ch/zavolan_group/pipelines/zarp/-/issues/118

@AngryMaciek
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Given that we do not call the API I don't think this issue is valid anymore, right @dominikburri?

@AngryMaciek
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My bad - it is valid, just that the call is not through an API but a sub-shell command, I think,

@uniqueg uniqueg added help wanted Extra attention is needed and removed help wanted Extra attention is needed labels Mar 10, 2023
@uniqueg uniqueg added the future will not be fixed for NOW label Apr 28, 2023
@uniqueg uniqueg changed the title Create Snakemake report feat: create Snakemake report Apr 28, 2023
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@uniqueg @AngryMaciek @mkatsanto