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DESCRIPTION
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DESCRIPTION
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Package: robustSingleCell
Type: Package
Title: Robust Clustering of Single Cell RNA-Seq Data
Version: 0.1.1
Authors@R:
c(
person("Assaf", "Magen", email = "assaf.magen@nih.gov", role = c("aut", "cph"),
comment = c(ORCID = "0000-0001-5473-274X")),
person("Meng", "Wang", email = "szmamie@live.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-3453-7805")),
person("Hao", "Chen", role = "ctb")
)
Description: Robust single cell clustering and comparison of population compositions across tissues and
experimental models via similarity analysis from Magen 2019 <doi:10.1101/543199>.
Depends: R (>= 3.2.0)
Imports:
utils,
grDevices,
graphics,
Matrix,
limma,
biomaRt,
dplyr,
ggplot2,
reshape2,
GGally,
ggrepel,
RColorBrewer,
gplots,
ggpubr,
cccd,
rslurm,
Rtsne,
igraph,
scales,
RANN,
Rcpp
LinkingTo: Rcpp
License: Artistic-2.0
URL: https://github.com/asmagen/robustSingleCell
BugReports: https://github.com/asmagen/robustSingleCell/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Suggests:
GEOquery,
knitr,
rmarkdown,
testthat
VignetteBuilder: knitr