DESCRIPTION

Package: stadia
Type: Package
Title: Statistical Batch-Aware Embedded Integration, Dimension Reduction and Alignment for Spatial Transcriptomics
Version: 1.0.1
Authors@R: 
    person("Yanfang", "Li", role = c("aut", "cre"), email="liyanfang1110@gmail.com")
Description: Integrate multi-source spatial transcriptomics data sets.
Depends: R (>= 3.5.0)
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3 
Imports: 
    Seurat, 
    mclust, 
    irlba, 
    Matrix,  
    Rcpp, 
    methods,
    progress, 
    mombf,
    BiocParallel,
    BiocSingular,
    BiocNeighbors
LinkingTo: 
    Rcpp, 
    RcppArmadillo,
    RcppDist
Collate: 
    'RcppExports.R'
    'main.R'
    'stadia-package.R'
    'utils_findMNN.R'
    'utils_internfunc.R'
    'utils_functions.R'
Suggests: 
    covr,
    ggplot2,
    knitr,
    patchwork,
    rmarkdown,
    stringr
VignetteBuilder: knitr
URL: https://github.com/yanfang-li/stadia,
    https://yanfang-li.github.io/stadia/
BugReports: https://github.com/yanfang-li/stadia/issues