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SHARE-seq mouse skin velocyto output #33

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chelseabright96 opened this issue Sep 10, 2023 · 2 comments
Open

SHARE-seq mouse skin velocyto output #33

chelseabright96 opened this issue Sep 10, 2023 · 2 comments

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@chelseabright96
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Good day,
I am interested to run MultiVelo on the SHARE-seq mouse skin dataset and compare the results with another model. I would like to request the unspliced and spliced count matrices that you used for your experiments if you still have them available. If not, It would be a huge help if you could share with me the input files you used for velocyto and the command for running velocyto. I am new to the tool and would appreciate any help as I am not sure about what files to use from the genome omnibus website.

Thanks in advance for your help!
@danielee0707
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I can share the Velocyto loom file through email if you share the address with me.

@chelseabright96
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Thank you! I have sent you an email

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@danielee0707 @chelseabright96