From ef24cbdb14f98574b62ade868b2d5c31baf7c707 Mon Sep 17 00:00:00 2001
From: Brycycle <44349959+Bryce-Davidson@users.noreply.github.com>
Date: Thu, 31 Oct 2024 12:34:07 -0700
Subject: [PATCH] docs: update vignettes to include correct install order

---
 vignettes/package_vignette.Rmd | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/vignettes/package_vignette.Rmd b/vignettes/package_vignette.Rmd
index c52d841..1bd4944 100644
--- a/vignettes/package_vignette.Rmd
+++ b/vignettes/package_vignette.Rmd
@@ -29,14 +29,15 @@ First, let's install necessary packages. You may skip this step if you have
 installed the packages before.
 
 ```{r, warning=FALSE, message=FALSE, eval=FALSE}
-# install iimi
-install.packages(c("iimi", "dplyr"))
-
 # install Biostrings
 if (!require("BiocManager", quietly = TRUE))
     install.packages("BiocManager")
 
+BiocManager::install(c("GenomicAlignments", "Rsamtools"))
 BiocManager::install("Biostrings")
+
+# install iimi
+install.packages(c("iimi", "dplyr"))
 ```
 
 ### 1.2. Loading packages