diff --git a/CHANGELOG.md b/CHANGELOG.md index e94a97cb..13c992af 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -6,6 +6,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ## [Unreleased] +## [7.0.0-rc.1] - 2023-08-28 + ### Added - Add compression of `SomaticSniper` `bam-readcount` output and move to `intermediate` directory - Add `ncbi_build` parameter @@ -19,6 +21,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - Add `split_VCF_bcftools` to `Mutect2` workflow, separating SNVs, MNVs and Indels ### Changed +- Fix CPU allocation behavior with Docker - Remove redundant directories in Intersect log output directories - Change compression of intersect MAF file to bzip2 - Update `README.md` diff --git a/config/methods.config b/config/methods.config index 68186a46..bb48d59d 100644 --- a/config/methods.config +++ b/config/methods.config @@ -182,5 +182,6 @@ methods { methods.set_output_directory() methods.set_pipeline_log() methods.check_valid_algorithms() + methods.setup_docker_cpus() } } diff --git a/nextflow.config b/nextflow.config index 61479ecb..b8535b85 100644 --- a/nextflow.config +++ b/nextflow.config @@ -9,6 +9,6 @@ manifest { nextflowVersion = '>=20.07.1' author = 'Yuan Zhe (Caden) Bugh, Mao Tian, Sorel Fitz-Gibbon' homePage = 'https://github.com/uclahs-cds/pipeline-call-sSNV' - version = '6.0.0' + version = '7.0.0-rc.1' name = 'call-sSNV' }