Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.
Genome Mining in Prokaryotes
Genome scAle Substrate Specific Enzyme pRediction
Antibiotic Resistant Target Seeker (ARTS)
Fungal bioActive compound Resistant Target Seeker (FunARTS)
Web application to display and log job uploads for the Fungal bioActive compound Resistant Target Seeker (FunARTS)
Genome Mining Workshop Overview
Reproducible code and data repository for the fungal ICS BGC prediction publication. GitHub repository is managed by Grant Nickles. For any data related questions email gnickles@wisc.edu or gnick317@gmail.com. For publication questions reach out to the corresponding authors Dr. Drott at Milton.Drott@usda.gov or Dr. Keller at npkeller@wisc.edu.
Web application to display and log job uploads for the Antibiotic Resistant Target Seeker (ARTS)
Retrieve chemical classes (ClassyFire/NPClassifier), as well as BGC classifications for MIBiG BGCs and match them.
A web UI for the fungal version of antiSMASH.
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