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differential-abundance-methods

Here are 4 public repositories matching this topic...

Russel88 / DAtest

Compare different differential abundance and expression methods

metagenomics rnaseq auc proteomics metabolomics microbiome false-positive-control differential-expression 16s otu marker-gene-analysis relative-abundances compare-methods differential-abundance-methods

Updated Mar 8, 2022
R

aametwally / MetaLonDA

METAgenomic LONgitudinal Differential Abundance method

metagenomics microbiome longitudinal-studies negative-binomial-distribution differential-abundance-methods smoothing-splines

Updated Dec 17, 2019
R

himelmallick / BenchmarkMicrobiome

Large-scale Benchmarking of Microbial Multivariable Association Methods

benchmarking metagenomics repeated-measures microbiome false-discovery-rate differential-abundance-methods synthetic-dataset-generation biobakery differential-abundance-analysis multiple-covariates

Updated Feb 2, 2021
R

benchdamic

mcalgaro93 / benchdamic

Benchmark of differential abundance methods on microbiome data

benchmark metagenomics microbiome differential-abundance-methods

Updated Nov 26, 2024
R

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