circular-dna

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Here are 4 public repositories matching this topic...

iprada / Circle-Map

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A method for circular DNA detection based on probabilistic mapping of ultrashort reads

ngs circrna structural-variation circrna-prediction genotyping circrnas eccdna ecdna circular-dna microdna

Updated Jul 17, 2024
Python

pk7zuva / Circle_finder

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Micro DNA identification

structural-variations circular-dna genome-duplication microhomology microdna

Updated Aug 5, 2021
Shell

crimBubble / ECCsplorer

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The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.

eccdna circular-dna

Updated Apr 15, 2024
Python

pierrj / ecc_caller

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ecc_caller is a pipeline designed to take Illumina NovaSeq paired end sequencing reads generated from isolated circular DNA and call eccDNA forming regions.

eccdna ecdna circular-dna

Updated Mar 10, 2023
Python

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circular-dna

Here are 4 public repositories matching this topic...

iprada / Circle-Map

pk7zuva / Circle_finder

crimBubble / ECCsplorer

pierrj / ecc_caller

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