Fix/anndata serialization #648
Workflow file for this run
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| name: Test | |
| on: | |
| schedule: | |
| - cron: 00 00 * * 1 | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python: ['3.8', '3.10', '3.11'] | |
| slepc: [noslepc] | |
| include: | |
| - os: macos-latest | |
| python: '3.9' | |
| slepc: noslepc | |
| - os: ubuntu-latest | |
| python: '3.9' | |
| slepc: slepc | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install pip dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox | |
| - name: Test | |
| run: | | |
| tox -e py${{ matrix.python }}-${{ matrix.slepc }} | |
| env: | |
| PYTEST_ADDOPTS: -vv -n 2 | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./coverage.xml | |
| flags: tests-${{ matrix.os }}-${{ matrix.python }}-${{ matrix.slepc }} | |
| name: unittests | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: false | |
| verbose: true |