Fix adata copy (coarse transition matrix) #246

	name: Lint

	on:
	schedule:
	- cron: 00 00 * * 1
	push:
	branches: [main]
	pull_request:
	branches: [main]

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	lint:
	name: Lint ${{ matrix.lint-kind }}
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	lint-kind: [code, docs]

	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	- name: Set up Python 3.10
	uses: actions/setup-python@v5
	with:
	python-version: '3.10'

	- name: Cache pre-commit
	if: ${{ matrix.lint-kind == 'code' }}
	uses: actions/cache@v4
	with:
	path: ~/.cache/pre-commit
	key: pre-commit-${{ env.pythonLocation }}-${{ hashFiles('**/.pre-commit-config.yaml') }}

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install tox

	- name: Install PyEnchant
	if: ${{ matrix.lint-kind == 'docs' }}
	run: \|
	sudo apt-get update -y
	sudo apt-get install libenchant-2-dev

	- name: Lint ${{ matrix.lint-kind }}
	run: \|
	tox -e lint-${{ matrix.lint-kind }}

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