.gitignore

.DS_Store
*~
*.pyc
*#
.#*
*.orig
*.kate-swp

**/.swp

# Merge backups (kdiff3?)
*.BACKUP*
*.BASE*
*.LOCAL*
*.REMOTE*

# libsbml auto-generated files
third_party/libSBML-5.9.0-Source/src/bindings/swig/libsbml-packages.h
third_party/libSBML-5.9.0-Source/src/bindings/swig/libsbml-packages.i
third_party/libSBML-5.9.0-Source/src/sbml/common/libsbml-config-common.h
third_party/libSBML-5.9.0-Source/src/sbml/extension/RegisterExtensions.cxx
third_party/libSBML-5.9.0-Source/src/sbml/extension/RegisterExtensions.h

# libsbml swig generated files
third_party/libSBML-5.9.0-Source/src/bindings/python/local-downcast-extension.cpp
third_party/libSBML-5.9.0-Source/src/bindings/python/local-downcast-namespaces.cpp
third_party/libSBML-5.9.0-Source/src/bindings/python/local-downcast-plugins.cpp
third_party/libSBML-5.9.0-Source/src/bindings/python/local-downcast.cpp
third_party/libSBML-5.9.0-Source/src/bindings/python/local-packages.i
wrappers/C/Testing/alexTestOutput.xml

# no idea
.swm
.swn
.swo

.vs/*

# for people who use clion
cmake-*
.idea

install-*
rr-install*
*.vcxproj
*.vcxproj.filter
*.sln
third_party/LLVM6.0.1
dependencies
dependencies*
cmake-*
.DS_Store
build
out

#test output file(s?)
test/sbml-test-suite/stochastic/results.tsv

install-release
build-debug
build-release
install-debug
roadrunner-install-*

# temp.
sundials
test/PerformanceTests/biomodels
test/PerformanceTests/biomodels.zip
test/PerformanceTests/simulations
test/PerformanceTests/OldData
build-msvc

biomodels
biomodels.zip