Replace rust with rustup in github CI #345
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build macOS ARM64 | |
| on: | |
| push: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: macos-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: Dependencies | |
| run: | | |
| brew install -f --overwrite cmake libomp rustup | |
| rustup-init --profile minimal -q -y | |
| - name: Build | |
| run: | | |
| mkdir -p build | |
| cd build | |
| LIBOMP=$(brew --prefix libomp) | |
| cmake \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DOpenMP_C_FLAGS="-Xpreprocessor -fopenmp -I${LIBOMP}/include" \ | |
| -DOpenMP_C_LIB_NAMES=omp \ | |
| -DOpenMP_CXX_FLAGS="-Xpreprocessor -fopenmp -I${LIBOMP}/include" \ | |
| -DOpenMP_CXX_LIB_NAMES=omp \ | |
| -DOpenMP_omp_LIBRARY=${LIBOMP}/lib/libomp.a \ | |
| .. | |
| make -j$(sysctl -n hw.ncpu) | |
| - name: Test | |
| run: ./regression/run_regression.sh ./build/src/foldseek SCRATCH |