From fd1d48ea64c0056367011f222ab209f72c1bc871 Mon Sep 17 00:00:00 2001
From: "Luis M. Rodriguez-R" <lmrodriguezr@gmail.com>
Date: Tue, 9 Jan 2024 13:20:56 +0100
Subject: [PATCH] Add genome MIMAG out-links

---
 app/views/genomes/_samples.html.erb | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/app/views/genomes/_samples.html.erb b/app/views/genomes/_samples.html.erb
index 47e1cfd4..969a0922 100644
--- a/app/views/genomes/_samples.html.erb
+++ b/app/views/genomes/_samples.html.erb
@@ -35,6 +35,13 @@
                       "\\1<a href='#{ena}\\2' target='_blank'>\\2</a>\\3"
                     )
                   end
+                  ncbi = 'https://www.ncbi.nlm.nih.gov/biosample/docs/packages/'
+                  v.map! do |i|
+                    i.gsub(
+                      /(^\s*|[^A-Z0-9\.])(MIMAG\.[A-Z0-9\.]+)(\s*$|[^A-Z0-9\.])/i,
+                      "\\1<a href='#{ncbi}\\2' target='_blank'>\\2</a>\\3"
+                    )
+                  end
                 else
                   v.map! { |i| sanitize(i) }
                 end